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View Structure Prediction Details

Protein: gi|22136626, gi|...
Organism: Arabidopsis thaliana
Length: 229 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|22136626, gi|....

Description E-value Query
Range
Subject
Range
gi|20807045, gi|... - gi|20807045|ref|NP_622216.1| 3-hydroxybutyryl-CoA dehydratase [Thermoanaerobacter tengcongensis MB4]...
gi|20807045 - gi|20807045|ref|NP_622216.1| enoyl-CoA hydratase [Thermoanaerobacter tengcongensis MB4]
250.0 [0..2] [228..33]

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Predicted Domain #1
Region A:
Residues: [1-229]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLKSLQNAFE SIHQDNSARV VMIRSLVPGV FCAGADLKER RTMSPSEVHT YVNSLRYMFS  60
   61 FIEALSIPTI AAIEGAALGG GLEMALACDL RICGENAVFG LPETGLAIIP GAGGTQRLSR 120
  121 LVGRSVSKEL IFTGRKIDAI EAANKGLVNI CVTAGEAHEK AIEMAQQINE KGPLAIKMAK 180
  181 KAIDEGIETN MASGLEVEEM CYQKLLNTQD RLEGLAAFAE KRKPLYTGN

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 60.30103
Match: 1ey3A
Description: Enoyl-CoA hydratase (crotonase)
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
enoyl-CoA hydratase activity 2.4936174743705 bayes_pls_golite062009
CoA carboxylase activity 2.3255403078982 bayes_pls_golite062009
ligase activity, forming carbon-carbon bonds 2.24331960813885 bayes_pls_golite062009
acetyl-CoA carboxylase activity 1.90441335082106 bayes_pls_golite062009
catalytic activity 1.83198156728699 bayes_pls_golite062009
3-hydroxyacyl-CoA dehydrogenase activity 1.0019269609588 bayes_pls_golite062009
dodecenoyl-CoA delta-isomerase activity 0.92729482343604 bayes_pls_golite062009
ligase activity 0.53243272380512 bayes_pls_golite062009
propionyl-CoA carboxylase activity 0.45280848544351 bayes_pls_golite062009
3-hydroxybutyryl-CoA epimerase activity 0.32149629337291 bayes_pls_golite062009
racemase and epimerase activity, acting on hydroxy acids and derivatives 0.180843676143191 bayes_pls_golite062009

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