| Protein: | PLRX2_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 847 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PLRX2_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
439.0 | [0..8] | [435..89] |
|
Region A: Residues: [1-54] |
1 11 21 31 41 51
| | | | | |
1 MERPFGCFFI LLLISYTVVA TFDDEPSFPE NADLTKDLEQ KCFSINKVDP NLKF
|
| Detection Method: |  |
| Confidence: | 11.045757 |
| Match: | 1yrgA |
| Description: | Rna1p (RanGAP1), N-terminal domain |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [55-384] |
1 11 21 31 41 51
| | | | | |
1 ENDRLKRAYI ALQAWKKAIY SDPFKTTANW VGSDVCSYNG VYCAPALDDD SLTVVAGVDL 60
61 NHADIAGHLP PELGLMTDLA LFHINSNRFC GIIPKSLSKL ALMYEFDVSN NRFVGQFPEV 120
121 SLSWPSLKFL DLRYNEFEGS LPSEIFDKDL DAIFLNNNRF ESVIPGTIGK SKASVVTFAN 180
181 NKFSGCIPKS IGNMKNLNEI VFTGNNLTGC FPNEIGLLNN VTVFDASKNG FVGSLPSTLS 240
241 GLASVEQLDL SHNKLTGFVV DKFCKLPNLD SFKFSYNFFN GEAESCVPGR NNGKQFDDTN 300
301 NCLQNRPSQK PAKQCLPVVS RPVDCSKDKC
|
| Detection Method: | |
| Confidence: | 48.522879 |
| Match: | 1ogqA |
| Description: | Polygalacturonase inhibiting protein PGIP |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [385-599] |
1 11 21 31 41 51
| | | | | |
1 SGGSNGGSSP SPNPPRTSEP KPSKPEPVMP KPSDSSKPET PKTPEQPSPK PQPPKHESPK 60
61 PEEPENKHEL PKQKESPKPQ PSKPEDSPKP EQPKPEESPK PEQPQIPEPT KPVSPPNEAQ 120
121 GPTPDDPYDA SPVKNRRSPP PPKVEDTRVP PPQPPMPSPS PPSPIYSPPP PVHSPPPPVY 180
181 SSPPPPHVYS PPPPVASPPP PSPPPPVHSP PPPPV
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [600-720] |
1 11 21 31 41 51
| | | | | |
1 FSPPPPVFSP PPPSPVYSPP PPSHSPPPPV YSPPPPTFSP PPTHNTNQPP MGAPTPTQAP 60
61 TPSSETTQVP TPSSESDQSQ ILSPVQAPTP VQSSTPSSEP TQVPTPSSSE SYQAPNLSPV 120
121 Q
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [721-847] |
1 11 21 31 41 51
| | | | | |
1 APTPVQAPTT SSETSQVPTP SSESNQSPSQ APTPILEPVH APTPNSKPVQ SPTPSSEPVS 60
61 SPEQSEEVEA PEPTPVNPSS VPSSSPSTDT SIPPPENNDD DDDGDFVLPP HIGFQYASPP 120
121 PPMFQGY
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
