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View Structure Prediction Details

Protein: M3KE2_ARATH
Organism: Arabidopsis thaliana
Length: 1367 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

No multiple sequence alignment data found for M3KE2_ARATH.

Predicted Domain #1
Region A:
Residues: [1-354]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MARQMTSSQF HKSKTLDNKY MLGDEIGKGA YGRVYIGLDL ENGDFVAIKQ VSLENIGQED  60
   61 LNTIMQEIDL LKNLNHKNIV KYLGSLKTKT HLHIILEYVE NGSLANIIKP NKFGPFPESL 120
  121 VTVYIAQVLE GLVYLHEQGV IHRDIKGANI LTTKEGLVKL ADFGVATKLN EADFNTHSVV 180
  181 GTPYWMAPEV IELSGVCAAS DIWSVGCTII ELLTCVPPYY DLQPMPALYR IVQDDTPPIP 240
  241 DSLSPDITDF LRLCFKKDSR QRPDAKTLLS HPWIRNSRRA LRSSLRHSGT IRYMKETDSS 300
  301 SEKDAEGSQE VVESVSAEKV EVTKTNSKSK LPVIGGASFR SEKDQSSPSD LGEE

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 74.522879
Match: 3comA
Description: No description for 3comA was found.

Predicted Domain #2
Region A:
Residues: [355-542]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GTDSEDDINS DQGPTLSMHD KSSRQSGTCS ISSDAKGTSQ DVLENHEKYD RDEIPGNLET  60
   61 EASEGRRNTL ATKLVGKEYS IQSSHSFSQK GEDGLRKAVK TPSSFGGNEL TRFSDPPGDA 120
  121 SLHDLFHPLD KVPEGKTNEA STSTPTANVN QGDSPVADGG KNDLATKLRA RIAQKQMEGE 180
  181 TGHSQDGG

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [543-633]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DLFRLMMGVL KDDVLNIDDL VFDEKVPPEN LFPLQAVEFS RLVSSLRPDE SEDAIVTSSL  60
   61 KLVAMFRQRP GQKAVFVTQN GFLPLMDLLD I

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 9.69897
Match: 1ul7A
Description: Solution structure of kinase associated domain 1 of mouse MAP/microtubule affinity-regulating kinase 3
Matching Structure (courtesy of the PDB):

Predicted Domain #4
Region A:
Residues: [634-787]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PKSRVICAVL QLINEIVKDN TDFLENACLV GLIPLVMSFA GFERDRSREI RKEAAYFLQQ  60
   61 LCQSSPLTLQ MFISCRGIPV LVGFLEADYA KHREMVHLAI DGMWQVFKLK KSTSRNDFCR 120
  121 IAAKNGILLR LVNTLYSLSE ATRLASISGD ALIL

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #5
Region A:
Residues: [788-971]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DGQTPRARSG QLDPNNPIFS QRETSPSVID HPDGLKTRNG GGEEPSHALT SNSQSSDVHQ  60
   61 PDALHPDGDR PRLSSVVADA TEDVIQQHRI SLSANRTSTD KLQKLAEGAS NGFPVTQPDQ 120
  121 VRPLLSLLEK EPPSRKISGQ LDYVKHIAGI ERHESRLPLL YASDEKKTNG DLEFIMAEFA 180
  181 EVSG

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #6
Region A:
Residues: [972-1367]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RGKENGNLDT APRYSSKTMT KKVMAIERVA STCGIASQTA SGVLSGSGVL NARPGSTTSS  60
   61 GLLAHALSAD VSMDYLEKVA DLLLEFARAE TTVKSYMCSQ SLLSRLFQMF NRVEPPILLK 120
  121 ILECTNHLST DPNCLENLQR ADAIKQLIPN LELKEGPLVY QIHHEVLSAL FNLCKINKRR 180
  181 QEQAAENGII PHLMLFVMSD SPLKQYALPL LCDMAHASRN SREQLRAHGG LDVYLSLLDD 240
  241 EYWSVIALDS IAVCLAQDVD QKVEQAFLKK DAIQKLVNFF QNCPERHFVH ILEPFLKIIT 300
  301 KSSSINKTLA LNGLTPLLIA RLDHQDAIAR LNLLKLIKAV YEKHPKPKQL IVENDLPQKL 360
  361 QNLIEERRDG QRSGGQVLVK QMATSLLKAL HINTIL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 73.0
Match: 2jdqA
Description: No description for 2jdqA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle