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View Structure Prediction Details

Protein: RIC4_ARATH
Organism: Arabidopsis thaliana
Length: 153 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RIC4_ARATH.

Description E-value Query
Range
Subject
Range
gi|18072917 - gi|18072917|emb|CAC83627.1| Rop-interacting protein [Arabidopsis thaliana]
136.0 [0..9] [124..3]

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Predicted Domain #1
Region A:
Residues: [1-82]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRDRMERLVV LPFSIGCISV SSVAVLSPLS KPHHHHSRQV IREQEEEDNM KNVFKFLAVS  60
   61 KPEISIGINR IFKSFKTISQ LF

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [83-153]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ADKDEEKEEV ETSGMEIGVP TNVKHVSHIG WESGLTAATG PGKGWEDLIP PELLAAAASK  60
   61 KEINPHLHPT L

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.27
Match: 1f3mA
Description: pak1 autoregulatory domain
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle