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View Structure Prediction Details

Protein: RIC4_ARATH
Organism: Arabidopsis thaliana
Length: 153 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RIC4_ARATH.

Description E-value Query
Range
Subject
Range
gi|18072917 - gi|18072917|emb|CAC83627.1| Rop-interacting protein [Arabidopsis thaliana]
136.0 [0..9] [124..3]

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Predicted Domain #1
Region A:
Residues: [1-82]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRDRMERLVV LPFSIGCISV SSVAVLSPLS KPHHHHSRQV IREQEEEDNM KNVFKFLAVS  60
   61 KPEISIGINR IFKSFKTISQ LF

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [83-153]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ADKDEEKEEV ETSGMEIGVP TNVKHVSHIG WESGLTAATG PGKGWEDLIP PELLAAAASK  60
   61 KEINPHLHPT L

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.27
Match: 1f3mA
Description: pak1 autoregulatory domain
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle