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View Structure Prediction Details

Protein: PUX10_ARATH
Organism: Arabidopsis thaliana
Length: 480 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PUX10_ARATH.

Description E-value Query
Range
Subject
Range
gi|7486906, gi|3... - pir||T01898 hypothetical protein T12H20.9 - Arabidopsis thaliana, gi|3600032|gb|AAC35520.1| contain...
373.0 [0..1] [480..1]

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Predicted Domain #1
Region A:
Residues: [1-91]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVDTVDKLGY FQAITGLEDA DLCTEILQAH GWDLELAISS FTSSDQDASS SAVDGGGNNR  60
   61 DHDHNNATVT PDYPPRGIVD DTELVMRDDG G

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 2.38
Match: 2damA
Description: No description for 2damA was found.

Predicted Domain #2
Region A:
Residues: [92-154]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GNRGPGVAWR IITLPISIVS GSLGLVSGAI GLGIWAAGGV LSYSLGMLGF RSGRGGGSES  60
   61 ARL

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [155-235]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VSVSSAVGEA MEFVALFDRD YGSNNAFKID FVVEGFMDAL QRSRSSFKLL FVYLHSPDHP  60
   61 DTPVFCGGTL CNEAVVAFVN E

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 32.0
Match: 2dlxA
Description: No description for 2dlxA was found.

Predicted Domain #4
Region A:
Residues: [236-413]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NFVSWGGSIR SSEGFKMSNS LKASRFPFCA VVMPAANQRI ALLQQVEGPK SPEEMLAILQ  60
   61 RIVEDSSPTL VTARVEAEER RTNLRLREEQ DAAYRAALEA DQAREQQRQE EKERLEREAA 120
  121 EAERKLKEEE EARERAAREA EERQAARVRM RQEKALALGE EPEKGPDVTQ VLVRFPNG

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 4.221849
Match: 2i1jA
Description: No description for 2i1jA was found.

Predicted Domain #5
Region A:
Residues: [414-480]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ERKGRMFKSE TKIQTLYDYV DSLGLLDTEE YSLITNFPRT VYGRDKESMS LKDAGLHPQA  60
   61 SLFIEIN

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 20.0
Match: 1wj4A
Description: Solution structure of the UBX domain of KIAA0794 protein
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle