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View Structure Prediction Details

Protein: PUX10_ARATH
Organism: Arabidopsis thaliana
Length: 480 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PUX10_ARATH.

Description E-value Query
Range
Subject
Range
gi|7486906, gi|3... - pir||T01898 hypothetical protein T12H20.9 - Arabidopsis thaliana, gi|3600032|gb|AAC35520.1| contain...
373.0 [0..1] [480..1]

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Predicted Domain #1
Region A:
Residues: [1-91]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVDTVDKLGY FQAITGLEDA DLCTEILQAH GWDLELAISS FTSSDQDASS SAVDGGGNNR  60
   61 DHDHNNATVT PDYPPRGIVD DTELVMRDDG G

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 2.38
Match: 2damA
Description: No description for 2damA was found.

Predicted Domain #2
Region A:
Residues: [92-154]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GNRGPGVAWR IITLPISIVS GSLGLVSGAI GLGIWAAGGV LSYSLGMLGF RSGRGGGSES  60
   61 ARL

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [155-235]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VSVSSAVGEA MEFVALFDRD YGSNNAFKID FVVEGFMDAL QRSRSSFKLL FVYLHSPDHP  60
   61 DTPVFCGGTL CNEAVVAFVN E

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 32.0
Match: 2dlxA
Description: No description for 2dlxA was found.

Predicted Domain #4
Region A:
Residues: [236-413]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NFVSWGGSIR SSEGFKMSNS LKASRFPFCA VVMPAANQRI ALLQQVEGPK SPEEMLAILQ  60
   61 RIVEDSSPTL VTARVEAEER RTNLRLREEQ DAAYRAALEA DQAREQQRQE EKERLEREAA 120
  121 EAERKLKEEE EARERAAREA EERQAARVRM RQEKALALGE EPEKGPDVTQ VLVRFPNG

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 4.221849
Match: 2i1jA
Description: No description for 2i1jA was found.

Predicted Domain #5
Region A:
Residues: [414-480]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ERKGRMFKSE TKIQTLYDYV DSLGLLDTEE YSLITNFPRT VYGRDKESMS LKDAGLHPQA  60
   61 SLFIEIN

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 20.0
Match: 1wj4A
Description: Solution structure of the UBX domain of KIAA0794 protein
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle