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View Structure Prediction Details

Protein: gi|15240586, gi|...
Organism: Arabidopsis thaliana
Length: 537 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|15240586, gi|....

Description E-value Query
Range
Subject
Range
gi|115441309, gi... - gi|56784222|dbj|BAD81717.1| putative lung alpha/beta hydrolase protein 1 [Oryza sativa Japonica Grou...
305.0 [0..16] [532..19]

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Predicted Domain #1
Region A:
Residues: [1-126]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNCAITEDDL ISPYLIIFKS LLLIPISHYL IFFFLTILLF LYFFLEIHFP KADPISLTFN  60
   61 PNSDFCKFIV SKCRLLHGRY FPTFWLSSPH LQTAFLTLFG KSPPFSYKRI LYQATDGGTI 120
  121 ALDWLM

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [127-418]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 HSDVVEGISQ VVNASNPGTD RTPIAIIVPG LTSDSSAAYI KHIAFRLAKE GWNVVVQNHR  60
   61 GLGGISLTSD CVYTAGWTED LRKVIAHIHS QFPEAPLFAV GTSIGANVLV KYLGEDGPNT 120
  121 PLIGATAVCS PWDLLICDRF INRKLVQKVY DRMLTIGLQG YAQLHHSIIS RIADWEGIKK 180
  181 SRSVREFDNY ATRLVAKFET TDTYYRRSSS SQYVENVAVP LLCISALDDP VCTREAIPWD 240
  241 ECRANKNIVL ATTTHGGHLA YYEGLTASSM WWTRVVHEYF EVLLSSPFAD RR

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 50.09691
Match: 1a8sA
Description: CHLOROPEROXIDASE F/PROPIONATE COMPLEX
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
hydrolase activity 1.6481148920688 bayes_pls_golite062009
binding 0.978846093152455 bayes_pls_golite062009
hydrolase activity, acting on ester bonds 0.642552200351214 bayes_pls_golite062009
carboxylesterase activity 0.0264147222103929 bayes_pls_golite062009

Predicted Domain #3
Region A:
Residues: [419-537]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 HKIIPEPLGS SIDQGPFVDA GEHGMVAAAS EVDTTRADAE PEDNAQIYVK TSNHLHKDNN  60
   61 PQVYNNILGP LKKRVDQLSR YSRKSIWLLA YIAIVTTWPL VGPALLFSIK RRFRKLVEK

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle