| Protein: | UBA1C_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 613 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for UBA1C_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
465.0 | [0..2] | [334..2518] |
|
|
430.0 | [0..2] | [447..376] |
|
|
429.0 | [0..2] | [420..292] |
|
|
421.0 | [0..2] | [420..206] |
|
Region A: Residues: [1-193] |
1 11 21 31 41 51
| | | | | |
1 MVWFQCDDCG ENLKKPRLPR HMSMCTATKF SCIDCGNMFG QVSVHYHNQC ITEAEKYGPM 60
61 VRSNGESSKQ KHDFDINAEL FNSQWFCSLC NATMTCEQDY FAHVYGKKHQ EKANEVADMD 120
121 YSKQQSEHPA VDKNNLTQQP DLDIYVGLSN DYPWFCSLCD INATSEQTLL AHANGKKHRV 180
181 KVERFDAEQQ KRQ
|
| Detection Method: |  |
| Confidence: | 53.30103 |
| Match: | 2i13A |
| Description: | No description for 2i13A was found. |
|
Region A: Residues: [194-314] |
1 11 21 31 41 51
| | | | | |
1 STQHSTVDKK DYSKQQIEVD INVGLSNCYP WFCSLCNVKA TCQQNLLSHA NGRKHRENVE 60
61 LFDATQQQQL EKTTVDKKDT TVNASDGNSE QKKVDLLVSS GVANGYSQAH KKRKLETCDE 120
121 T
|
| Detection Method: | |
| Confidence: | 2.22 |
| Match: | 1zu1A |
| Description: | Solution Structure of the N-terminal Zinc Fingers of the Xenopus laevis double stranded RNA binding protein ZFa |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [315-404] |
1 11 21 31 41 51
| | | | | |
1 WKREVVQAEE AKGGGEQKSE SKKAKKQDKE KKRKKDKKQT KSDSDFEHDK EDIKQLLVAY 60
61 SKEELVNLIY KTAEKGSRLI SAILESADRD
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.511 | a.24.10 | Histidine-containing phosphotransfer domain, HPT domain |
| View | Download | 0.374 | a.150.1 | Anti-sigma factor AsiA |
| View | Download | 0.362 | a.158.1 | F-box domain |
| View | Download | 0.293 | a.29.16 | Description not found. |
| View | Download | 0.280 | a.24.10 | Histidine-containing phosphotransfer domain, HPT domain |
| View | Download | 0.257 | a.74.1 | Cyclin-like |
| View | Download | 0.254 | a.22.1 | Histone-fold |
| View | Download | 0.205 | c.55.6 | DNA repair protein MutS, domain II |
|
Region A: Residues: [405-613] |
1 11 21 31 41 51
| | | | | |
1 IAQRNIFVRG FGWDTTQENL KTAFESYGEI EECSVVMDKD TGRGKGYGFV MFKTRKGARE 60
61 ALKRPEKRMY NRIVVCNLAS EKPGKAGKEQ DMAEPVNIDL TKMANQSEAV LPGIELGRGH 120
121 VLEKMHHQQQ QTMDMFGQNM PFYGYSHQFP GFDPMYGALS GNQMLAGLPN YGMFGSGMMT 180
181 NQGSMLPPPN HLGMAGQYFG DGEQAWHQR
|
| Detection Method: | |
| Confidence: | 23.69897 |
| Match: | 1pgzA |
| Description: | Crystal Structure of UP1 Complexed With d(TTAGGGTTAG(6-MI)G); A Human Telomeric Repeat Containing 6-methyl-8-(2-deoxy-beta-ribofuranosyl)isoxanthopteridine (6-MI) |
Matching Structure (courtesy of the PDB): |
|
