Protein: | UBA1C_ARATH |
Organism: | Arabidopsis thaliana |
Length: | 613 amino acids |
Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for UBA1C_ARATH.
Description | E-value | Query Range |
Subject Range |
|
465.0 | [0..2] | [334..2518] |
|
430.0 | [0..2] | [447..376] |
|
429.0 | [0..2] | [420..292] |
|
421.0 | [0..2] | [420..206] |
Region A: Residues: [1-193] |
1 11 21 31 41 51 | | | | | | 1 MVWFQCDDCG ENLKKPRLPR HMSMCTATKF SCIDCGNMFG QVSVHYHNQC ITEAEKYGPM 60 61 VRSNGESSKQ KHDFDINAEL FNSQWFCSLC NATMTCEQDY FAHVYGKKHQ EKANEVADMD 120 121 YSKQQSEHPA VDKNNLTQQP DLDIYVGLSN DYPWFCSLCD INATSEQTLL AHANGKKHRV 180 181 KVERFDAEQQ KRQ |
Detection Method: | ![]() |
Confidence: | 53.30103 |
Match: | 2i13A |
Description: | No description for 2i13A was found. |
Region A: Residues: [194-314] |
1 11 21 31 41 51 | | | | | | 1 STQHSTVDKK DYSKQQIEVD INVGLSNCYP WFCSLCNVKA TCQQNLLSHA NGRKHRENVE 60 61 LFDATQQQQL EKTTVDKKDT TVNASDGNSE QKKVDLLVSS GVANGYSQAH KKRKLETCDE 120 121 T |
Detection Method: | ![]() |
Confidence: | 2.22 |
Match: | 1zu1A |
Description: | Solution Structure of the N-terminal Zinc Fingers of the Xenopus laevis double stranded RNA binding protein ZFa |
Matching Structure (courtesy of the PDB):![]() |
Region A: Residues: [315-404] |
1 11 21 31 41 51 | | | | | | 1 WKREVVQAEE AKGGGEQKSE SKKAKKQDKE KKRKKDKKQT KSDSDFEHDK EDIKQLLVAY 60 61 SKEELVNLIY KTAEKGSRLI SAILESADRD |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
MCM Score |
SCOP Match |
SCOP Description | ||
View | Download | 0.511 | a.24.10 | Histidine-containing phosphotransfer domain, HPT domain |
View | Download | 0.374 | a.150.1 | Anti-sigma factor AsiA |
View | Download | 0.362 | a.158.1 | F-box domain |
View | Download | 0.293 | a.29.16 | Description not found. |
View | Download | 0.280 | a.24.10 | Histidine-containing phosphotransfer domain, HPT domain |
View | Download | 0.257 | a.74.1 | Cyclin-like |
View | Download | 0.254 | a.22.1 | Histone-fold |
View | Download | 0.205 | c.55.6 | DNA repair protein MutS, domain II |
Region A: Residues: [405-613] |
1 11 21 31 41 51 | | | | | | 1 IAQRNIFVRG FGWDTTQENL KTAFESYGEI EECSVVMDKD TGRGKGYGFV MFKTRKGARE 60 61 ALKRPEKRMY NRIVVCNLAS EKPGKAGKEQ DMAEPVNIDL TKMANQSEAV LPGIELGRGH 120 121 VLEKMHHQQQ QTMDMFGQNM PFYGYSHQFP GFDPMYGALS GNQMLAGLPN YGMFGSGMMT 180 181 NQGSMLPPPN HLGMAGQYFG DGEQAWHQR |
Detection Method: | ![]() |
Confidence: | 23.69897 |
Match: | 1pgzA |
Description: | Crystal Structure of UP1 Complexed With d(TTAGGGTTAG(6-MI)G); A Human Telomeric Repeat Containing 6-methyl-8-(2-deoxy-beta-ribofuranosyl)isoxanthopteridine (6-MI) |
Matching Structure (courtesy of the PDB):![]() |