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Protein Overview: UBA1C_ARATH

General Information:
Name(s) found: UBA1C_ARATH [Swiss-Prot]
Description(s) found:
Found 12 descriptions.
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  • UBP1-associated proteins 1C OS=Arabidopsis thaliana GN=UBA1C PE=3 SV=2 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 613 amino acids

    Gene Ontology:
    Cellular Component: intracellular [IEA]
    Biological Process: NONE FOUND
    Molecular Function: nucleic acid binding [IEA]
    nucleotide binding [IEA]
    zinc ion binding [IEA]
    RNA binding [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVWFQCDDCG ENLKKPRLPR HMSMCTATKF SCIDCGNMFG QVSVHYHNQC ITEAEKYGPM  60
   61 VRSNGESSKQ KHDFDINAEL FNSQWFCSLC NATMTCEQDY FAHVYGKKHQ EKANEVADMD 120
  121 YSKQQSEHPA VDKNNLTQQP DLDIYVGLSN DYPWFCSLCD INATSEQTLL AHANGKKHRV 180
  181 KVERFDAEQQ KRQSTQHSTV DKKDYSKQQI EVDINVGLSN CYPWFCSLCN VKATCQQNLL 240
  241 SHANGRKHRE NVELFDATQQ QQLEKTTVDK KDTTVNASDG NSEQKKVDLL VSSGVANGYS 300
  301 QAHKKRKLET CDETWKREVV QAEEAKGGGE QKSESKKAKK QDKEKKRKKD KKQTKSDSDF 360
  361 EHDKEDIKQL LVAYSKEELV NLIYKTAEKG SRLISAILES ADRDIAQRNI FVRGFGWDTT 420
  421 QENLKTAFES YGEIEECSVV MDKDTGRGKG YGFVMFKTRK GAREALKRPE KRMYNRIVVC 480
  481 NLASEKPGKA GKEQDMAEPV NIDLTKMANQ SEAVLPGIEL GRGHVLEKMH HQQQQTMDMF 540
  541 GQNMPFYGYS HQFPGFDPMY GALSGNQMLA GLPNYGMFGS GMMTNQGSML PPPNHLGMAG 600
  601 QYFGDGEQAW HQR

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..193] PSI-BLAST 53.30103 No description for 2i13A was found.
    2 View Details [194..314] FFAS03 2.22 Solution Structure of the N-terminal Zinc Fingers of the Xenopus laevis double stranded RNA binding protein ZFa
    3 View Details [315..404] deduced N/A No confident structure predictions are available.
    4 View Details [405..613] PSI-BLAST 23.69897 Crystal Structure of UP1 Complexed With d(TTAGGGTTAG(6-MI)G); A Human Telomeric Repeat Containing 6-methyl-8-(2-deoxy-beta-ribofuranosyl)isoxanthopteridine (6-MI)


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.96

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle