| Protein: | MY108_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 323 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MY108_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
253.0 | [0..15] | [323..15] |
|
Region A: Residues: [1-127] |
1 11 21 31 41 51
| | | | | |
1 MDEKGRSLKN NNMEDEMDLK RGPWTAEEDF KLMNYIATNG EGRWNSLSRC AGLQRTGKSC 60
61 RLRWLNYLRP DVRRGNITLE EQLLILELHS RWGNRWSKIA QYLPGRTDNE IKNYWRTRVQ 120
121 KHAKQLK
|
| Detection Method: |  |
| Confidence: | 41.0 |
| Match: | 1h88C |
| Description: | c-Myb, DNA-binding domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.334577365229545 | bayes_pls_golite062009 |
| transcription regulator activity | 0.0696342306231097 | bayes_pls_golite062009 |
|
Region A: Residues: [128-323] |
1 11 21 31 41 51
| | | | | |
1 CDVNSQQFKD TMKYLWMPRL VERIQSASAS SAAAATTTTT TTTGSAGTSS CITTSNNQFM 60
61 NYDYNNNNMG QQFGVMSNND YITPENSSVA VSPASDLTEY YSAPNPNPEY YSGQMGNSYY 120
121 PDQNLVSSQL LPDNYFDYSG LLDEDLTAMQ EQSNLSWFEN INGAASSSDS LWNIGETDEE 180
181 FWFLQQQQQF NNNGSF
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
