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View Structure Prediction Details

Protein: gi|10176708, gi|...
Organism: Arabidopsis thaliana
Length: 287 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|10176708, gi|....

Description E-value Query
Range
Subject
Range
gi|91805675 - gi|91805675|gb|ABE65566.1| hypothetical protein At5g35890 [Arabidopsis thaliana]
359.0 [0..1] [287..20]

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Predicted Domain #1
Region A:
Residues: [1-105]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLAAVYGSAP LPRGFLGFLL LGGPLLGLFV YLQPILGFGS PFSPLVWPRS VTLKSLISPL  60
   61 ELISRLSALI GYGLRLSHLS ISMVLVCNFI SRTLANCNSS SASSS

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [106-287]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 HQSFRLMDLV YLGFRYAIRL ENNGIMISSL RRGGYRNFFN PLSPNPLNIE SEPYLSNIFK  60
   61 IDIHESKDLR SYGIMRPALW SSAYQMLLNS IPLNPPGDRT HSTPLLVDDH FLLNLPGTAR 120
  121 ISTLRIFSMS PHLLWTVTIT SSTALFVDDV LTTRALTGTS RLRSIGPQVS WILCRFIFAI 180
  181 FV

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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Created and Maintained by: Michael Riffle