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View Structure Prediction Details

Protein: gi|10176708, gi|...
Organism: Arabidopsis thaliana
Length: 287 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|10176708, gi|....

Description E-value Query
Range
Subject
Range
gi|91805675 - gi|91805675|gb|ABE65566.1| hypothetical protein At5g35890 [Arabidopsis thaliana]
359.0 [0..1] [287..20]

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Predicted Domain #1
Region A:
Residues: [1-105]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLAAVYGSAP LPRGFLGFLL LGGPLLGLFV YLQPILGFGS PFSPLVWPRS VTLKSLISPL  60
   61 ELISRLSALI GYGLRLSHLS ISMVLVCNFI SRTLANCNSS SASSS

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.582 a.2.8 Eukaryotic DNA topoisomerase I, dispensable insert domain
View Download 0.539 d.58.12 eEF-1beta-like
View Download 0.492 f.13.1 Family A G protein-coupled receptor-like
View Download 0.454 a.156.1 S13-like H2TH domain
View Download 0.438 f.13.1 Family A G protein-coupled receptor-like

Predicted Domain #2
Region A:
Residues: [106-287]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 HQSFRLMDLV YLGFRYAIRL ENNGIMISSL RRGGYRNFFN PLSPNPLNIE SEPYLSNIFK  60
   61 IDIHESKDLR SYGIMRPALW SSAYQMLLNS IPLNPPGDRT HSTPLLVDDH FLLNLPGTAR 120
  121 ISTLRIFSMS PHLLWTVTIT SSTALFVDDV LTTRALTGTS RLRSIGPQVS WILCRFIFAI 180
  181 FV

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle