| Protein: | gi|18404660, gi|... |
| Organism: | Arabidopsis thaliana |
| Length: | 357 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|18404660, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
298.0 | [0..8] | [357..1] |
|
Region A: Residues: [1-132] |
1 11 21 31 41 51
| | | | | |
1 MIKNLSNMKN DNQKREKCCE YIEALEEERR KINVFQRELP LCVELVTQAI EAYKREISGT 60
61 STDNLYGQSE CSEQTTGECG RILDLFIPIK HSSTSIEEEV DDKDDDDEEH QSHETDIDFD 120
121 DKNMKSEWLK SV
|
| Detection Method: |  |
| Confidence: | 6.221849 |
| Match: | 1dc7A |
| Description: | NTRC receiver domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| signal transducer activity | 2.07885074402355 | bayes_pls_golite062009 |
| molecular transducer activity | 2.07885074402355 | bayes_pls_golite062009 |
| transcription regulator activity | 1.72455852503325 | bayes_pls_golite062009 |
| two-component response regulator activity | 1.53373140048441 | bayes_pls_golite062009 |
|
Region A: Residues: [133-279] |
1 11 21 31 41 51
| | | | | |
1 QLWNQSDAVV SNNRQDRSQE KTETLVELIK INDEAAKKNN NIKSPVTTSD GGSGGGGGRR 60
61 GQRKNRRCWS QELHRRFLNA LKQLGGPHVA TPKQIRDIMK VDGLTNDEVK SHLQKYRLHA 120
121 RRPSQTTPNN RNSQTQHFVV VGGIWVP
|
| Detection Method: | |
| Confidence: | 18.69897 |
| Match: | 1irzA |
| Description: | Arr10-B |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.334577365229545 | bayes_pls_golite062009 |
| transcription regulator activity | 0.0696342306231097 | bayes_pls_golite062009 |
|
Region A: Residues: [280-357] |
1 11 21 31 41 51
| | | | | |
1 QTNHSTANAV NAVASGETTG IYGPMVSSLP SEWPRHSNFG RKISEDRSRC SNNGFFRCSS 60
61 PAMSCSTRTK TKDAKIIS
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
