| Protein: | ORP1A_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 760 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ORP1A_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
553.0 | [0..10] | [760..34] |
|
Region A: Residues: [1-211] |
1 11 21 31 41 51
| | | | | |
1 MYAATPETPF GSARSQPVIT RSVSQRYNHP GQSNHHHLLH SLSFNHQNVL ALPAAAREPP 60
61 VDVKINDIAG NSIAGILYKW VNYGKGWRPR WFVLQDGVLS YYKIKGPDKI VVIHETEKGS 120
121 RVIGEESTRM ISRNKRHAAT NNTNHQLRRK PFGEVHLKVS SIRESRSDDK RFSIFTGTKR 180
181 LHLRAETRED REAWIEALQA VKDMFPRMSN C
|
| Detection Method: |  |
| Confidence: | 15.09691 |
| Match: | 1fhwA |
| Description: | Grp1 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 2.42470476396787 | bayes_pls_golite062009 |
| protein binding | 2.1446140694885 | bayes_pls_golite062009 |
| receptor binding | 0.3173431866346 | bayes_pls_golite062009 |
|
Region A: Residues: [212-389] |
1 11 21 31 41 51
| | | | | |
1 ELMAPTNNLD ISIEKLRLRL VEEGVSESAI QDCEQITRSE FSAIQSQLLL LKQKQWLLID 60
61 TLRQLETEKV DLENTVVDET QRQAGNGDSE ETISESDDDN EQFDEAEEEM DTCDSLSSSS 120
121 FKSIGSVFRT SSFSSDDDGL TNGFESENDD VDPSIKTIGF NYPHVKRRKK LPDPVEKE
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [390-760] |
1 11 21 31 41 51
| | | | | |
1 KSVSLWSMIK DNIGKDLTKV CLPVYFNEPL SSLQKCFEDL EYSYLLDQAS EWGKRGNNLM 60
61 RILNVAAFAV SGYASTEGRI CKPFNPMLGE TYEADYPDKG LRFFSEKVSH HPMIVACHCD 120
121 GTGWKFWGDS NLKSKFWGRS IQLDPIGLLT LQFDDGEIVQ WSKVTTSIYN LILGKLYCDH 180
181 YGTMKIEGNG EYSCKLKFKE QSMIDRNPHQ VQGIVEDKNG KTVARLFGKW DESIHYVMVD 240
241 QGKVNESHLL WKRNKQPENP TKYNLTRFGI TLNELTPGLK EKLPPTDSRL RPDQRYLEKG 300
301 EYEMGNAEKL RLEQRQRQAR EMQERGWKPK WFRKEKGSET YRYIGGYWEA RDSGSWDDCP 360
361 DIFGQVHQSI K
|
| Detection Method: | |
| Confidence: | 65.221849 |
| Match: | 1zhtA |
| Description: | Structure of yeast oxysterol binding protein Osh4 in complex with 7-hydroxycholesterol |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| sterol binding | 3.12877992228795 | bayes_pls_golite062009 |
| steroid binding | 2.54679035876403 | bayes_pls_golite062009 |
| binding | 1.67154210149282 | bayes_pls_golite062009 |
| lipid binding | 1.46539100663772 | bayes_pls_golite062009 |
| oxysterol binding | 1.1738554488982 | bayes_pls_golite062009 |
| phospholipid binding | 0.0867097353003303 | bayes_pls_golite062009 |
