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View Structure Prediction Details

Protein: gi|91806279, gi|...
Organism: Arabidopsis thaliana
Length: 479 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|91806279, gi|....

Description E-value Query
Range
Subject
Range
EFG_BACLD - Elongation factor G OS=Bacillus licheniformis (strain ATCC 14580 / DSM 13 / JCM 2505 / NBRC 12200 / ...
368.0 [0..28] [477..2]

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Predicted Domain #1
Region A:
Residues: [1-479]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDLKKPSARG GDDKQQIVGD EHSRRNKLSE EDKVRSPICC MMGHIDTGKT KLLDYITGNV  60
   61 QEGEAGGTTQ KMGATYLSAR NILEKTMELK SDTKLKVPRP LFIDTPGYEF YTNLRSRGLG 120
  121 LCDFAILVVD IMHGLEPQTI ECLNLLRMKN TEFIIALNKV DRLYGWRICE NAPILEAMKQ 180
  181 QTKDVINEFN MRLNEIINQF KEQGLNSELY YKNKEMGETF SIVPTCAISG EGIPDLLLLL 240
  241 VQLTQKTMVE KLITYVDKVQ CTVLEVKVME GYGTTIDVVL VNGELHEGGQ IVVCGLQGPI 300
  301 VTTIRALLTP HPIKELHVNG NHVHHEVIKA AECINIIAKD LEHVIVGTAL HVVGPDDDIE 360
  361 AIKELVMEDV NSVLSRIDKS GEGVYIQAST LGSLEALLEF LKSPAVKLPV GGIGIGPVQK 420
  421 KDVMKAGVML ERKKEFATIL ALDVEVTTEA RELADEMEVK IFCSDIMYHL FDQYQAYIC

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 62.0
Match: 1g7rA
Description: Initiation factor IF2/eIF5b, domains 2 and 4; Initiation factor IF2/eIF5b, domain 3; Initiation factor IF2/eIF5b, N-terminal (G) domain
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.470983068319171 bayes_pls_golite062009
hydrolase activity 0.0582794297634999 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle