| Protein: | SYPC_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 530 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SYPC_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
399.0 | [0..8] | [530..143] |
|
Region A: Residues: [1-530] |
1 11 21 31 41 51
| | | | | |
1 MADPSEQKEK VVKEKKEKVK KEKVVKEKVA KASSSGQKKK DVKKETGLGL SVKKDENFGE 60
61 WYSEVCKQDM IEYYDISGCY ILRPWSMAIW EIMQIFFDAE IKKMKVKNCY FPLFVSPGVL 120
121 EKEKDHIEGF APEVAWVTKS GKSDLEVPIA IRPTSETVMY PYYSKWIRGH RDLPLKLNQW 180
181 CNVVRWEFSN PTPFIRSREF LWQEGHTAFA TKAEADEEVL QILELYRRIY EEYLAVPVVK 240
241 GMKSENEKFA GGLYTTSVEA FIPNTGRGVQ GATSHCLGQN FAKMFEINFE NEKAETEMVW 300
301 QNSWAYSTRT IGVMIMTHGD DKGLVLPPKV ASVQVVVIPV PYKDANTQGI YDACTATASA 360
361 LCEAGIRAEE DLRDNYSPGW KYSDWEMKGV PLRIEIGPRD LENDQVRTVR RDNGVKEDIP 420
421 RGSLVEHVKE LLEKIQQNMY EVAKQKREAC VQEVKTWDEF IKALNEKKLI LAPWCDEEEV 480
481 ERDVKARTKG ETGAAKTLCS PFDQPELPEG TLCFASGKPA KKWTYWGRSY
|
| Detection Method: |  |
| Confidence: | 95.30103 |
| Match: | 1h4qA |
| Description: | Prolyl-tRNA synthetase (ProRS) domain; C-terminal domain of ProRS; Prolyl-tRNA synthetase (ProRS) |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| ligase activity, forming carbon-oxygen bonds | 7.20130208252979 | bayes_pls_golite062009 |
| ligase activity, forming aminoacyl-tRNA and related compounds | 7.20130208252979 | bayes_pls_golite062009 |
| aminoacyl-tRNA ligase activity | 7.18884532579969 | bayes_pls_golite062009 |
| ligase activity | 6.46734856052643 | bayes_pls_golite062009 |
| proline-tRNA ligase activity | 3.48471569615425 | bayes_pls_golite062009 |
| catalytic activity | 2.36416267096403 | bayes_pls_golite062009 |
| phenylalanine-tRNA ligase activity | 1.82630084735103 | bayes_pls_golite062009 |
| serine-tRNA ligase activity | 1.67995723068335 | bayes_pls_golite062009 |
| threonine-tRNA ligase activity | 1.61348476813499 | bayes_pls_golite062009 |
| histidine-tRNA ligase activity | 1.44658852946316 | bayes_pls_golite062009 |
| alanine-tRNA ligase activity | 1.37855221028045 | bayes_pls_golite062009 |
| lysine-tRNA ligase activity | 1.2286808923607 | bayes_pls_golite062009 |
| glycine-tRNA ligase activity | 1.22845858760023 | bayes_pls_golite062009 |
| asparagine-tRNA ligase activity | 0.50755166961092 | bayes_pls_golite062009 |
| binding | 0.005931666351503 | bayes_pls_golite062009 |
