| Protein: | NPY3_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 579 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for NPY3_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
521.0 | [0..1] | [579..1] |
|
|
520.0 | [0..1] | [563..1] |
|
|
510.0 | [0..19] | [570..63] |
|
|
503.0 | [0..1] | [573..1] |
|
Region A: Residues: [1-122] |
1 11 21 31 41 51
| | | | | |
1 MKFMKLGSKP DSFQSDEDCV RYVATELATD VVVIVGDVKF HLHKFPLLSK SARLQKLIAT 60
61 TTTDEQSDDD EIRIPDIPGG PPAFEICAKF CYGMAVTLNA YNVVAVRCAA EYLEMYESIE 120
121 NG
|
| Detection Method: |  |
| Confidence: | 23.69897 |
| Match: | 2nn2A |
| Description: | No description for 2nn2A was found. |
|
Region A: Residues: [123-331] |
1 11 21 31 41 51
| | | | | |
1 NLVYKMEVFL NSSVLRSWKD SIIVLQTTRS FYPWSEDVKL DVRCLESIAL KAAMDPARVD 60
61 WSYTYNRRKL LPPEMNNNSV PRDWWVEDLA ELSIDLFKRV VSTIRRKGGV LPEVIGEALE 120
121 VYAAKRIPGF MIQNDDNDDE EDVMEQRSLL ETLVSMLPSE KQSVSCGFLI KLLKSSVSFE 180
181 CGEEERKELS RRIGEKLEEA NVGDLLIRA
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [332-426] |
1 11 21 31 41 51
| | | | | |
1 PEGGETVYDI DIVETLIDEF VTQTEKRDEL DCSDDINDSS KANVAKLIDG YLAEISRIET 60
61 NLSTTKFITI AEKVSTFPRQ SHDGVYRAID MFLKQ
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.786 | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.776 | d.14.1 | Ribosomal protein S5 domain 2-like |
| View | Download | 0.702 | a.69.4 | Description not found. |
| View | Download | 0.659 | d.352.1 | Description not found. |
| View | Download | 0.652 | a.112.1 | Description not found. |
| View | Download | 0.652 | a.177.1 | Sigma2 domain of RNA polymerase sigma factors |
| View | Download | 0.625 | a.39.1 | EF-hand |
| View | Download | 0.608 | a.24.17 | Group V grass pollen allergen |
| View | Download | 0.495 | d.150.1 | 4'-phosphopantetheinyl transferase |
| View | Download | 0.477 | d.108.1 | Acyl-CoA N-acyltransferases (Nat) |
| View | Download | 0.360 | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.335 | a.200.1 | Description not found. |
| View | Download | 0.315 | a.74.1 | Cyclin-like |
|
Region A: Residues: [427-579] |
1 11 21 31 41 51
| | | | | |
1 HPGITKSEKK SSSKLMDCRK LSPEACAHAV QNERLPLRVV VQILFFEQVR ATTKPSLPPS 60
61 GSHGSSRTTT EEECESVTAT EETTTTTRDK TSSSEKTKAK GVVMSRIFSK LWTGKDKDGV 120
121 GDVSSSDTSE SPGSVTTVGD KSTPSTRRRR SSS
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
