| Protein: | NU50B_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 465 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for NU50B_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
214.0 | [0..112] | [465..1132] |
|
Region A: Residues: [1-224] |
1 11 21 31 41 51
| | | | | |
1 MGDSDNAIPF SRKRTALKEL SRDNPGLDDD DEDTSALESG TFNTASKEVL ASRRIIRVRR 60
61 TDRSATAPPA SNPFTGIRLV PFTAPAPSTA AAETTKPLSA GKQETLADGR SDATKETDGD 120
121 SKEKSDAIDA VGKQETQGDE ISAKTKDIID GGEKEMSEAV NSVEGGGAVN KNEDEIKTTM 180
181 VTEVAAGEET VKDDNNNSNT VEGSDCVVKD TGGNQTEKEG KEGD
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [225-278] |
1 11 21 31 41 51
| | | | | |
1 GNEDTEKNGD SGALSSFHQH SSSKNAFTGL ASTGFSASSF SFGLVPQEGS TGSG
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [279-465] |
1 11 21 31 41 51
| | | | | |
1 SEQSSFSFGQ ANNGNSSLFG ASVATSITTK STETTTAFPS KQDVSVETGE ENEKAAFTAD 60
61 SVMFEYLEGG WKERGKGELK VNISTTENRK ARLVMRSKGN YRLTLNASLY PEMKLAKMDK 120
121 KGITFACVNS VSDAKDGLST LALKFKDPTV VEEFRAVIEE HKDSKPSVAE AAAPLKTPEN 180
181 SPSAEDA
|
| Detection Method: | |
| Confidence: | 39.522879 |
| Match: | 1k5dB |
| Description: | Ran-binding protein 1, Ranbp1 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.597587183571285 | bayes_pls_golite062009 |
| protein binding | 0.29116370406325 | bayes_pls_golite062009 |
