| Protein: | NCED3_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 599 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for NCED3_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
748.0 | [0..3] | [598..1] |
|
Region A: Residues: [1-69] |
1 11 21 31 41 51
| | | | | |
1 MASFTATAAV SGRWLGGNHT QPPLSSSQSS DLSYCSSLPM ASRVTRKLNV SSALHTPPAL 60
61 HFPKQSSNS
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [70-599] |
1 11 21 31 41 51
| | | | | |
1 PAIVVKPKAK ESNTKQMNLF QRAAAAALDA AEGFLVSHEK LHPLPKTADP SVQIAGNFAP 60
61 VNEQPVRRNL PVVGKLPDSI KGVYVRNGAN PLHEPVTGHH FFDGDGMVHA VKFEHGSASY 120
121 ACRFTQTNRF VQERQLGRPV FPKAIGELHG HTGIARLMLF YARAAAGIVD PAHGTGVANA 180
181 GLVYFNGRLL AMSEDDLPYQ VQITPNGDLK TVGRFDFDGQ LESTMIAHPK VDPESGELFA 240
241 LSYDVVSKPY LKYFRFSPDG TKSPDVEIQL DQPTMMHDFA ITENFVVVPD QQVVFKLPEM 300
301 IRGGSPVVYD KNKVARFGIL DKYAEDSSNI KWIDAPDCFC FHLWNAWEEP ETDEVVVIGS 360
361 CMTPPDSIFN ESDENLKSVL SEIRLNLKTG ESTRRPIISN EDQQVNLEAG MVNRNMLGRK 420
421 TKFAYLALAE PWPKVSGFAK VDLTTGEVKK HLYGDNRYGG EPLFLPGEGG EEDEGYILCF 480
481 VHDEKTWKSE LQIVNAVSLE VEATVKLPSR VPYGFHGTFI GADDLAKQVV
|
| Detection Method: | |
| Confidence: | 123.0 |
| Match: | 2biwA |
| Description: | Crystal structure of apocarotenoid cleavage oxygenase from Synechocystis, native enzyme |
Matching Structure (courtesy of the PDB): |
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