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View Structure Prediction Details

Protein: gi|15230755, gi|...
Organism: Arabidopsis thaliana
Length: 763 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|15230755, gi|....

Description E-value Query
Range
Subject
Range
gi|12321912 - gi|12321912|gb|AAG50991.1|AC036106_4 protein kinase, putative; 42705-46677 [Arabidopsis thaliana]
499.0 [0..1] [762..1]
gi|108862829 - gi|108862829|gb|ABA98953.2| protein kinase family protein, putative, expressed [Oryza sativa (japoni...
364.0 [0..13] [726..6]
FYN_XIPHE - Tyrosine-protein kinase Fyn OS=Xiphophorus helleri GN=fyn PE=2 SV=3
327.0 [0..295] [713..119]

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Predicted Domain #1
Region A:
Residues: [1-201]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVKLLQDPIT PNKELLKKMI ELEKSQEHLM QEMSRLKVST ELRKESRIQC SMNLRPSPWK  60
   61 FTHKQYLNIL QSMAQSVHAF DLNMRIIFWN AMAEKVYGYS AAEAVGQNPI DVMVDDRDAP 120
  121 FAMTIAQLCS NGESWTGKFP VKRRTGEKFS AVTTCSPFYA DDGSLIGIVS ITSDVAPYLN 180
  181 PTISLAKLKA SEVETSSTPA R

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 13.221849
Match: 2gj3A
Description: No description for 2gj3A was found.

Predicted Domain #2
Region A:
Residues: [202-302]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NSFAFKLGLD TKGAVVSKLG LDSDQPIQVA IASKISDLAS KVRNKVRSKM PAGDSSVTVF  60
   61 EGETGDSHHS DHGVFGATLS DHMDDAASSG ASTPRGDFIQ S

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [303-763]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PFGVFTCNDD KFSSEPFIDS SDGYPITLFT SKAEEWMVKK GLSWPWKGNE QEGSRVKPTY  60
   61 SVWPCVQNEQ KKDKSHQINR YSGVKSKSHA SESNKPTNNK ASGLRSSCIN ANSAISRGII 120
  121 SHSTMNKVDT NSNCLEYEIL WDDLTIGEQI GQGSCGTVYH GLWFGSDVAV KLISKQEYSE 180
  181 EVIQSFRQEV SLMQRLRHPN VLLFMGAVTL PQGLCIVSEF LPRGSLFRLL QRNMSKLDWR 240
  241 RRINMALDIA RGMNYLHRCS PPIIHRDLKS SNLLVDKNLT VKVADFGLSR IKHHTYLTSK 300
  301 SGKGMPQWMA PEVLRNESAD EKSDIYSFGV VLWELATEKI PWENLNSMQV IGAVGFMNQR 360
  361 LEIPKDIDPD WISLIESCWH RDAKLRPTFQ ELMERLRDLQ RKYTIQFQAT RAALSDKNKE 420
  421 REKERVGLFE QQQLVETCCA GVPMSSTIEQ GYGIENIMKV G

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 86.39794
Match: 2h8hA
Description: No description for 2h8hA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle