| Protein: | gi|4204272, gi|2... |
| Organism: | Arabidopsis thaliana |
| Length: | 725 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|4204272, gi|2....
| Description | E-value | Query Range |
Subject Range |
|
|
485.0 | [0..1] | [687..1] |
|
Region A: Residues: [1-124] |
1 11 21 31 41 51
| | | | | |
1 MEPPPPHFSR AKPPCRLSDP AQPHKLCRRR RPSYPPLSIC FTCKGKQLRS SAYYYYCATC 60
61 NLEFHRGCHI FLPVIRSSFH PSHPLTFFSS DPKFDVSIIP KYWRDSSATE ESSDESINQL 120
121 TIEY
|
| Detection Method: |  |
| Confidence: | 2.68 |
| Match: | 1v5nA |
| Description: | Solution Structure of DC1 Domain of PDI-like Hypothetical Protein from Arabidopsis thaliana |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [125-240] |
1 11 21 31 41 51
| | | | | |
1 LGDVSDDDGE DSHSDHDLGA SEDDGEDSHS DHDLGASDDD GEDSHSDHDL GARDDDGNGN 60
61 GAGDVHADGE ASLSDGNHLK CKCCGVPLQM TYYHCSICKF NLNLDCSMRQ PPPIIS
|
| Detection Method: | |
| Confidence: | 5.69897 |
| Match: | 1v5nA |
| Description: | Solution Structure of DC1 Domain of PDI-like Hypothetical Protein from Arabidopsis thaliana |
| Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [241-297] |
1 11 21 31 41 51
| | | | | |
1 HLKSHEHTLT LFPIRLPLPC DACGLSLNDT EDLVYSCLPC SRMVHRSCIY LPRVIKI
|
| Detection Method: | |
| Confidence: | 4.522879 |
| Match: | 1tbnA |
| Description: | NMR STRUCTURE OF A PROTEIN KINASE C-G PHORBOL-BINDING DOMAIN, MINIMIZED AVERAGE STRUCTURE |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [298-498] |
1 11 21 31 41 51
| | | | | |
1 TRHQHRLSHT SSLQPGDFSC GVCRQTVDVN YGQYSCNKEC HYAVHSKCAT RNDVWDGKDL 60
61 DGVPEEPDEF IEPPFLKIDE ETIQHFSHHH YLKLHEKKTI YKRDKFCEAC TLPVMISQRF 120
121 YGCMQCDFVL DETCASLPRK KNHPLHKHPL NLHTLPLGES AMINKGATSK DIFKCIGCGR 180
181 IGCGFYYKCD EKNCDEFLLD V
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [499-614] |
1 11 21 31 41 51
| | | | | |
1 RCASLPDPFV HDCHPHDHPL FFNLTKGNCM GCGSDSCSSY FLECIKCKSF LGIKCATLPC 60
61 EAHYTHDRHP LTLCYEEEED TTSGQYWCEI CEFKLDPKTW FYTCDYCMIT LHVNCL
|
| Detection Method: | |
| Confidence: | 2.31 |
| Match: | 1v5nA |
| Description: | Solution Structure of DC1 Domain of PDI-like Hypothetical Protein from Arabidopsis thaliana |
| Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [615-725] |
1 11 21 31 41 51
| | | | | |
1 LGKDIYLKPC HIFKVGLFYK EVEIARNDGN SRLFCYICRL RCGQTLVFKW LGRRKSFCTL 60
61 RCIGKYVKDT RGYYDAVAMG YFESYPTNLV TSPEASDSSV IKSAFDFLFR D
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.561 | d.21.1 | Diaminopimelate epimerase-like |
| View | Download | 0.555 | d.58.44 | Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains |
| View | Download | 0.555 | d.58.44 | Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains |
| View | Download | 0.547 | d.58.39 | Glutamyl tRNA-reductase catalytic, N-terminal domain |
| View | Download | 0.530 | d.21.1 | Diaminopimelate epimerase-like |
| View | Download | 0.527 | a.152.1 | Antioxidant defence protein AhpD |
| View | Download | 0.514 | d.52.7 | Ribosome-binding factor A, RbfA |
| View | Download | 0.511 | a.61.1 | Retroviral matrix proteins |
