| Protein: | SYP51_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 232 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SYP51_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
155.0 | [0..12] | [229..131] |
|
Region A: Residues: [1-232] |
1 11 21 31 41 51
| | | | | |
1 MASSSDSWMR AYNEALKLSE EINGMISERS SSAVTGPDAQ RRASAIRRKI TIFGNKLDSL 60
61 QSLLAEIHGK PISEKEMNRR KDMVGNLRSK ANQMANALNM SNFANRDSLL GPDIKPDDSM 120
121 SRVTGMDNQG IVGYQRQVMR EQDEGLEQLE GTVMSTKHIA LAVSEELDLQ TRLIDDLDYH 180
181 VDVTDSRLRR VQKSLAVMNK NMRSGCSCMS MLLSVLGIVG LAVVIWMLVK YM
|
| Detection Method: |  |
| Confidence: | 26.154902 |
| Match: | 1dn1B |
| Description: | Syntaxin 1A N-terminal domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| SNAP receptor activity | 1.98218731493745 | bayes_pls_golite062009 |
| transporter activity | 1.74189664015129 | bayes_pls_golite062009 |
| binding | 1.67115282869397 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 1.49085442233849 | bayes_pls_golite062009 |
| protein binding | 1.29784552353214 | bayes_pls_golite062009 |
| transmembrane transporter activity | 1.13101548288086 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 0.643064875848901 | bayes_pls_golite062009 |
| ion transmembrane transporter activity | 0.370484918396857 | bayes_pls_golite062009 |
| protein transporter activity | 0.14240382084743 | bayes_pls_golite062009 |
| channel activity | 0.0647076360772156 | bayes_pls_golite062009 |
| passive transmembrane transporter activity | 0.0647076360772156 | bayes_pls_golite062009 |
| substrate-specific channel activity | 0.0435980899803177 | bayes_pls_golite062009 |
