| Protein: | SYP22_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 268 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SYP22_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
194.0 | [0..1] | [266..1048] |
|
Region A: Residues: [1-268] |
1 11 21 31 41 51
| | | | | |
1 MSFQDLESGR GRSTRKFNGG RQDSTQAVAS GIFQINTGVS TFQRLVNTLG TPKDTPELRE 60
61 KLHKTRLHIG QLVKDTSAKL KEASETDHQS GVNPSKKIAD AKLARDFQAV LKEFQKAQQT 120
121 AAERETTYTP FVPQSALPSS YTAGEVDKVP EQRAQLQESK RQELVLLDNE IAFNEAVIEE 180
181 REQGIQEIHQ QIGEVNEIFK DLAVLVNDQG VMIDDIGTHI DNSRAATSQG KSQLVQAAKT 240
241 QKSNSSLTCL LLVIFGIVLL IVIIVLAA
|
| Detection Method: |  |
| Confidence: | 29.69897 |
| Match: | 1dn1B |
| Description: | Syntaxin 1A N-terminal domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| SNAP receptor activity | 3.50393203740159 | bayes_pls_golite062009 |
| phosphatidic acid binding | 3.06159508496392 | bayes_pls_golite062009 |
| calcium channel inhibitor activity | 2.5370773879611 | bayes_pls_golite062009 |
| binding | 2.13344290488739 | bayes_pls_golite062009 |
| myosin head/neck binding | 1.76421579737303 | bayes_pls_golite062009 |
| transporter activity | 1.74189664015129 | bayes_pls_golite062009 |
| protein binding | 1.51700626946713 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 1.49085442233849 | bayes_pls_golite062009 |
| transmembrane transporter activity | 1.13101548288086 | bayes_pls_golite062009 |
| protein transporter activity | 1.0920578675702 | bayes_pls_golite062009 |
| extracellular ligand-gated ion channel activity | 0.86350507004267 | bayes_pls_golite062009 |
| excitatory extracellular ligand-gated ion channel activity | 0.86350507004267 | bayes_pls_golite062009 |
| SNARE binding | 0.71459772253941 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 0.643064875848901 | bayes_pls_golite062009 |
| gated channel activity | 0.621670335227137 | bayes_pls_golite062009 |
| ligand-gated channel activity | 0.41937155561589 | bayes_pls_golite062009 |
| ligand-gated ion channel activity | 0.41937155561589 | bayes_pls_golite062009 |
| ion transmembrane transporter activity | 0.370484918396857 | bayes_pls_golite062009 |
| arachidonic acid binding | 0.187597126289389 | bayes_pls_golite062009 |
| passive transmembrane transporter activity | 0.0647076360772156 | bayes_pls_golite062009 |
| channel activity | 0.0647076360772156 | bayes_pls_golite062009 |
| substrate-specific channel activity | 0.0435980899803177 | bayes_pls_golite062009 |
| phospholipid binding | 0.0172309833091902 | bayes_pls_golite062009 |
