| Protein: | SYP21_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 279 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SYP21_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
156.0 | [0..33] | [277..131] |
|
Region A: Residues: [1-279] |
1 11 21 31 41 51
| | | | | |
1 MSFQDLEAGT RSPAPNRFTG GRQQRPSSRG DPSQEVAAGI FRISTAVNSF FRLVNSIGTP 60
61 KDTLELRDKL QKTRLQISEL VKNTSAKLKE ASEADLHGSA SQIKKIADAK LAKDFQSVLK 120
121 EFQKAQRLAA EREITYTPVV TKEIPTSYNA PELDTESLRI SQQQALLLQS RRQEVVFLDN 180
181 EITFNEAIIE EREQGIREIE DQIRDVNGMF KDLALMVNHQ GNIVDDISSN LDNSHAATTQ 240
241 ATVQLRKAAK TQRSNSSLTC LLILIFGIVL LIVIIVVLV
|
| Detection Method: |  |
| Confidence: | 26.0 |
| Match: | 1dn1B |
| Description: | Syntaxin 1A N-terminal domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| phosphatidic acid binding | 5.99692791841048 | bayes_pls_golite062009 |
| SNAP receptor activity | 3.50393203740159 | bayes_pls_golite062009 |
| calcium channel inhibitor activity | 2.5370773879611 | bayes_pls_golite062009 |
| binding | 2.13344290488739 | bayes_pls_golite062009 |
| myosin head/neck binding | 1.76421579737303 | bayes_pls_golite062009 |
| transporter activity | 1.74189664015129 | bayes_pls_golite062009 |
| protein binding | 1.51700626946713 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 1.49085442233849 | bayes_pls_golite062009 |
| transmembrane transporter activity | 1.13101548288086 | bayes_pls_golite062009 |
| protein transporter activity | 1.0920578675702 | bayes_pls_golite062009 |
| extracellular ligand-gated ion channel activity | 0.86350507004267 | bayes_pls_golite062009 |
| excitatory extracellular ligand-gated ion channel activity | 0.86350507004267 | bayes_pls_golite062009 |
| SNARE binding | 0.71459772253941 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 0.643064875848901 | bayes_pls_golite062009 |
| gated channel activity | 0.621670335227137 | bayes_pls_golite062009 |
| ligand-gated channel activity | 0.41937155561589 | bayes_pls_golite062009 |
| ligand-gated ion channel activity | 0.41937155561589 | bayes_pls_golite062009 |
| ion transmembrane transporter activity | 0.370484918396857 | bayes_pls_golite062009 |
| arachidonic acid binding | 0.187597126289389 | bayes_pls_golite062009 |
| passive transmembrane transporter activity | 0.0647076360772156 | bayes_pls_golite062009 |
| channel activity | 0.0647076360772156 | bayes_pls_golite062009 |
| substrate-specific channel activity | 0.0435980899803177 | bayes_pls_golite062009 |
| phospholipid binding | 0.0172309833091902 | bayes_pls_golite062009 |
