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View Structure Prediction Details

Protein: SUVH9_ARATH
Organism: Arabidopsis thaliana
Length: 650 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SUVH9_ARATH.

Description E-value Query
Range
Subject
Range
gi|162464159, gi... - gi|20977606|gb|AAM28230.1| SET domain protein 105 [Zea mays], gi|162464159|ref|NP_001105189.1| SET d...
576.0 [0..8] [637..20]

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Predicted Domain #1
Region A:
Residues: [1-155]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGSSHIPLDP SLNPSPSLIP KLEPVTESTQ NLAFQLPNTN PQALISSAVS DFNEATDFSS  60
   61 DYNTVAESAR SAFAQRLQRH DDVAVLDSLT GAIVPVEENP EPEPNPYSTS DSSPSVATQR 120
  121 PRPQPRSSEL VRITDVGPES ERQFREHVRK TRMIY

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [156-351]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DSLRMFLMME EAKRNGVGGR RARADGKAGK AGSMMRDCML WMNRDKRIVG SIPGVQVGDI  60
   61 FFFRFELCVM GLHGHPQSGI DFLTGSLSSN GEPIATSVIV SGGYEDDDDQ GDVIMYTGQG 120
  121 GQDRLGRQAE HQRLEGGNLA MERSMYYGIE VRVIRGLKYE NEVSSRVYVY DGLFRIVDSW 180
  181 FDVGKSGFGV FKYRLE

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 79.958607
Match: PF02182.8
Description: No description for PF02182.8 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [352-650]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RIEGQAEMGS SVLKFARTLK TNPLSVRPRG YINFDISNGK ENVPVYLFND IDSDQEPLYY  60
   61 EYLAQTSFPP GLFVQQSGNA SGCDCVNGCG SGCLCEAKNS GEIAYDYNGT LIRQKPLIHE 120
  121 CGSACQCPPS CRNRVTQKGL RNRLEVFRSL ETGWGVRSLD VLHAGAFICE YAGVALTREQ 180
  181 ANILTMNGDT LVYPARFSSA RWEDWGDLSQ VLADFERPSY PDIPPVDFAM DVSKMRNVAC 240
  241 YISHSTDPNV IVQFVLHDHN SLMFPRVMLF AAENIPPMTE LSLDYGVVDD WNAKLAICN

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 63.154902
Match: 2o8jA
Description: No description for 2o8jA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle