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View Structure Prediction Details

Protein: SUVH8_ARATH
Organism: Arabidopsis thaliana
Length: 755 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SUVH8_ARATH.

Description E-value Query
Range
Subject
Range
gi|20160708, gi|... - gi|34909174|ref|NP_915934.1| similar to SET1 [Oryza sativa (japonica cultivar-group)], gi|20160708|d...
522.0 [0..55] [754..9]

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Predicted Domain #1
Region A:
Residues: [1-146]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVSTPPTLLM LFDDGDAGPS TGLVHREKSD AVNEEAHATS VPPHAPPQTL WLLDNFNIED  60
   61 SYDRDAGPST GPVHRERSDA VNEEAHATSI PPHAPPQTLW LLDNFNIEDS YDRDAGPSTS 120
  121 PIDREASHEV NEDAHATSAP PHVMVS

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [147-246]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PLQNRRPFDQ FNNQPYDASA GPSTGPGKRG RGRPKGSKNG SRKPKKPKAY DNNSTDASAG  60
   61 PSSGLGKRRC GRPKGLKNRS RKPKKPKADD PNSKMVISCP 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [247-449]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DFDSRITEAE RESGNQEIVD SILMRFDAVR RRLCQLNYRK DKILTASTNC MNLGVRTNMT  60
   61 RRIGPIPGVQ VGDIFYYWCE MCLVGLHRNT AGGIDSLLAK ESGVDGPAAT SVVTSGKYDN 120
  121 ETEDLETLIY SGHGGKPCDQ VLQRGNRALE ASVRRRNEVR VIRGELYNNE KVYIYDGLYL 180
  181 VSDCWQVTGK SGFKEYRFKL LRK

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 36.853872
Match: PF02182.8
Description: No description for PF02182.8 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [450-755]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PGQPPGYAIW KLVENLRNHE LIDPRQGFIL GDLSFGEEGL RVPLVNEVDE EDKTIPDDFD  60
   61 YIRSQCYSGM TNDVNVDSQS LVQSYIHQNC TCILKNCGQL PYHDNILVCR KPLIYECGGS 120
  121 CPTRMVETGL KLHLEVFKTS NCGWGLRSWD PIRAGTFICE FTGVSKTKEE VEEDDDYLFD 180
  181 TSRIYHSFRW NYEPELLCED ACEQVSEDAN LPTQVLISAK EKGNVGRFMN HNCWPNVFWQ 240
  241 PIEYDDNNGH IYVRIGLFAM KHIPPMTELT YDYGISCVEK TGEDEVIYKG KKICLCGSVK 300
  301 CRGSFG

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 72.69897
Match: 2r3aA
Description: No description for 2r3aA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle