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Protein Overview: gi|20160708, gi|...

General Information:
Name(s) found: gi|34909174 [NCBI NR]
gi|20160708 [NCBI NR]
gi|18844764 [NCBI NR]
gi|115440621 [NCBI NR]
gi|113534121 [NCBI NR]
Description(s) found:
Found 8 descriptions.
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  • gi|34909174|ref|NP_915934.1| similar to SET1 [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|20160708|dbj|BAB89651.1| putative SET domain protein 113 [Oryza sativa Japonica Group] [NCBI NR]
  • gi|18844764|dbj|BAB85235.1| putative SET domain protein 113 [Oryza sativa Japonica Group] [NCBI NR]
  • gi|115440621|ref|NP_001044590.1| Os01g0811300 [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|113534121|dbj|BAF06504.1| Os01g0811300 [Oryza sativa Japonica Group] [NCBI NR]
    • Organism: Oryza sativa Japonica Group
    Length: 736 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNRESNFMPT PDQDVLEVKP LRTLAPMFPA PLGIDVLNRL TAPPLVFVAP AGQFPGGFGS  60
   61 LNIPAVRSFA AFGGQDASGG KTAGGGDQDA SGGKTAAGGD QDAGRGETAA FGGQETVRGE 120
  121 FVANGTPNVG ASATGPIDAT PISACKSTQP SVISLDDDDN DDDEPYGGNQ TSASGRKIKR 180
  181 PSHLKGYNVS DGLGTDSSNG TKKRPKTSNR KAATDNEISL MPPSSDPREV VEVLLMTFEA 240
  241 LRRRHLQLDE TQETSKRADL KAGAIMLASN LRANIGKRIG AVPGVEVGDI FYFRMELCII 300
  301 GLHAPSMGGI DYMNKFGDED DSVAICIVAA GVYENDDDDT DTLVYSGSGG ISRNSEEKQD 360
  361 QKLERGNLAL ERSLSRKNVI RVVRGYKDPA CLTGKVYIYD GLYKIHESWK ERTKTGINCF 420
  421 KYKLQREPGQ PDAVAIWKMC QRWVENPAAR GKVLHPDLSS GAENLPVCLI NDVNSEKGPG 480
  481 HFNYITQVKY LKPLRSMKPF QGCRCTSVCL PGDTSCDCAQ HNGGDLPYSS SGLLVCRKLM 540
  541 VYECGESCRC SINCRNRVAQ KGVRIHLEVF RTTNRGWGLR SWDPIRAGSF ICEYVGEVVD 600
  601 DTKVNLDGED DYLFRTVCPG EKTLKWNYGP ELIGEHSINI SADTFEPLPI KISAMKMGNV 660
  661 ARFMNHSCNP NTFWQPVQFD HGEDGYPHIM FFALKHIPPM TELTYDYGDI GCESRGVGSR 720
  721 AKNCLCGSSN CRGFFS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..225] PSI-BLAST 14.09691 No description for 1y0fB was found.
    2 View Details [226..427] Pfam 54.585027 No description for PF02182.8 was found. No confident structure predictions are available.
    3 View Details [428..736] PSI-BLAST 79.09691 No description for 2o8jA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.94

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle