| Protein: | SPD2_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 340 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPD2_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
295.0 | [0..1] | [340..1] |
|
Region A: Residues: [1-340] |
1 11 21 31 41 51
| | | | | |
1 MSSTQEASVT DLPVKRPREA EEDNNGGAME TENGGGEIKE PSCMSSIIPG WFSEISPMWP 60
61 GEAHSLKVEK ILFQGKSDYQ DVIVFQSATY GKVLVLDGVI QLTERDECAY QEMITHLPLC 120
121 SISNPKKVLV IGGGDGGVLR EVARHSSVEQ IDICEIDKMV VDVAKQYFPN VAVGYEDPRV 180
181 NLIIGDGVAF LKNAAEGTYD AVIVDSSDPI GPAKELFEKP FFESVNRALR PGGVVCTQAE 240
241 SLWLHMDIIE DIVSNCRDIF KGSVNYAWTS VPTYPSGVIG FMLCSSEGPQ VDFKKPVSLI 300
301 DTDESSIKSH CPLKYYNAEI HSAAFCLPSF AKKVIDSKAN
|
| Detection Method: |  |
| Confidence: | 79.30103 |
| Match: | 1xj5A |
| Description: | X-RAY STRUCTURE OF SPERMIDINE SYNTHASE FROM ARABIDOPSIS THALIANA GENE AT1G23820 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| spermidine synthase activity | 2.31131562815571 | bayes_pls_golite062009 |
| transferase activity | 1.77671966857605 | bayes_pls_golite062009 |
| transcription regulator activity | 1.61435611638306 | bayes_pls_golite062009 |
| DNA binding | 1.53375495589674 | bayes_pls_golite062009 |
| nucleic acid binding | 1.31440474302645 | bayes_pls_golite062009 |
| catalytic activity | 1.25333584501255 | bayes_pls_golite062009 |
| binding | 0.976078016260105 | bayes_pls_golite062009 |
| S-adenosylmethionine-dependent methyltransferase activity | 0.837368219068434 | bayes_pls_golite062009 |
| N-methyltransferase activity | 0.69697643153076 | bayes_pls_golite062009 |
| transferase activity, transferring one-carbon groups | 0.644010137949015 | bayes_pls_golite062009 |
| methyltransferase activity | 0.635463629299812 | bayes_pls_golite062009 |
| protein methyltransferase activity | 0.57386401278889 | bayes_pls_golite062009 |
