| Protein: | SPD1_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 334 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPD1_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
311.0 | [0..2] | [334..2] |
|
Region A: Residues: [1-334] |
1 11 21 31 41 51
| | | | | |
1 MDAKETSATD LKRPREEDDN GGAATMETEN GDQKKEPACF STVIPGWFSE MSPMWPGEAH 60
61 SLKVEKVLFQ GKSDYQDVIV FQSATYGKVL VLDGVIQLTE RDECAYQEMI THLPLCSIPN 120
121 PKKVLVIGGG DGGVLREVAR HASIEQIDMC EIDKMVVDVS KQFFPDVAIG YEDPRVNLVI 180
181 GDGVAFLKNA AEGSYDAVIV DSSDPIGPAK ELFEKPFFQS VARALRPGGV VCTQAESLWL 240
241 HMDIIEDIVS NCREIFKGSV NYAWTSVPTY PSGVIGFMLC STEGPDVDFK HPLNPIDESS 300
301 SKSNGPLKFY NAEIHSAAFC LPSFAKKVIE SKAN
|
| Detection Method: |  |
| Confidence: | 86.69897 |
| Match: | 1xj5A |
| Description: | X-RAY STRUCTURE OF SPERMIDINE SYNTHASE FROM ARABIDOPSIS THALIANA GENE AT1G23820 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| spermidine synthase activity | 2.31131562815571 | bayes_pls_golite062009 |
| transferase activity | 1.77671966857605 | bayes_pls_golite062009 |
| transcription regulator activity | 1.61435611638306 | bayes_pls_golite062009 |
| DNA binding | 1.53375495589674 | bayes_pls_golite062009 |
| nucleic acid binding | 1.31440474302645 | bayes_pls_golite062009 |
| catalytic activity | 1.25333584501255 | bayes_pls_golite062009 |
| binding | 0.976078016260105 | bayes_pls_golite062009 |
| S-adenosylmethionine-dependent methyltransferase activity | 0.837368219068434 | bayes_pls_golite062009 |
| N-methyltransferase activity | 0.69697643153076 | bayes_pls_golite062009 |
| transferase activity, transferring one-carbon groups | 0.644010137949015 | bayes_pls_golite062009 |
| methyltransferase activity | 0.635463629299812 | bayes_pls_golite062009 |
| protein methyltransferase activity | 0.57386401278889 | bayes_pls_golite062009 |
