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View Structure Prediction Details

Protein: SAHH1_ARATH
Organism: Arabidopsis thaliana
Length: 485 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SAHH1_ARATH.

Description E-value Query
Range
Subject
Range
SAHH_CATRO - Adenosylhomocysteinase OS=Catharanthus roseus GN=SAHH PE=2 SV=1
563.0 [0..1] [485..1]

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Predicted Domain #1
Region A:
Residues: [1-485]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALLVEKTSS GREYKVKDMS QADFGRLELE LAEVEMPGLM ACRTEFGPSQ PFKGARITGS  60
   61 LHMTIQTAVL IETLTALGAE VRWCSCNIFS TQDHAAAAIA RDSAAVFAWK GETLQEYWWC 120
  121 TERALDWGPG GGPDLIVDDG GDATLLIHEG VKAEEIFEKT GQVPDPTSTD NPEFQIVLSI 180
  181 IKEGLQVDPK KYHKMKERLV GVSEETTTGV KRLYQMQQNG TLLFPAINVN DSVTKSKFDN 240
  241 LYGCRHSLPD GLMRATDVMI AGKVAVICGY GDVGKGCAAA MKTAGARVIV TEIDPICALQ 300
  301 ALMEGLQVLT LEDVVSEADI FVTTTGNKDI IMVDHMRKMK NNAIVCNIGH FDNEIDMLGL 360
  361 ETYPGVKRIT IKPQTDRWVF PETKAGIIVL AEGRLMNLGC ATGHPSFVMS CSFTNQVIAQ 420
  421 LELWNEKASG KYEKKVYVLP KHLDEKVALL HLGKLGARLT KLSKDQSDYV SIPIEGPYKP 480
  481 PHYRY

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 138.0
Match: 1v8bA
Description: Crystal structure of a hydrolase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
adenosylhomocysteinase activity 4.75102111339352 bayes_pls_golite062009
trialkylsulfonium hydrolase activity 4.75102111339352 bayes_pls_golite062009
catalytic activity 1.79741889688267 bayes_pls_golite062009
oxidoreductase activity 0.9367410227151 bayes_pls_golite062009
binding 0.784517759335365 bayes_pls_golite062009
oxidoreductase activity, acting on CH-OH group of donors 0.418775403210681 bayes_pls_golite062009
oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor 0.32207755075663 bayes_pls_golite062009
DNA binding 0.158019531459925 bayes_pls_golite062009
nucleic acid binding 0.0191997392158629 bayes_pls_golite062009
transcription regulator activity 0.012678711735872 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle