| Protein: | SY125_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 298 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SY125_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
198.0 | [0..35] | [289..131] |
|
Region A: Residues: [1-298] |
1 11 21 31 41 51
| | | | | |
1 MNDLFSNSFK KNQAQLGDVE AGQETMNLDK FFEDVENVKD DMKGVEALYK KLQDSNEECK 60
61 TVHNAKKVKE LRAKMDGDVA MVLKRVKIIK QKLEALEKAN ANSRNVPGCG PGSSTDRTRS 120
121 SVVSGLGKKL KDLMDSFQGL RARMNNEYKE TVERRYFTIT GEKADEQTID NLIASGESEN 180
181 FLQKAIQEQG RGQILDTISE IQERHDAVKE IEKNLLELHQ VFLDMAALVE AQGQQLNNIE 240
241 SHVAKASSFV RRGTDQLQDA REYQKSSRKW TCYAIILFIV IFILLLIPLL PHIMLMLK
|
| Detection Method: |  |
| Confidence: | 36.39794 |
| Match: | 1dn1B |
| Description: | Syntaxin 1A N-terminal domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| SNAP receptor activity | 3.50393203740159 | bayes_pls_golite062009 |
| calcium channel inhibitor activity | 3.28773614634352 | bayes_pls_golite062009 |
| phosphatidic acid binding | 3.16686091277844 | bayes_pls_golite062009 |
| protein transporter activity | 2.96543140800925 | bayes_pls_golite062009 |
| protein binding | 2.66728689880621 | bayes_pls_golite062009 |
| binding | 2.33192450173199 | bayes_pls_golite062009 |
| SNARE binding | 1.85060343142976 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 1.84645272212664 | bayes_pls_golite062009 |
| transporter activity | 1.74189664015129 | bayes_pls_golite062009 |
| myosin head/neck binding | 1.62782051964352 | bayes_pls_golite062009 |
| extracellular ligand-gated ion channel activity | 1.54368755758216 | bayes_pls_golite062009 |
| excitatory extracellular ligand-gated ion channel activity | 1.54368755758216 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 1.49085442233849 | bayes_pls_golite062009 |
| transmembrane transporter activity | 1.13101548288086 | bayes_pls_golite062009 |
| calcium channel regulator activity | 1.03966990325407 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 0.643064875848901 | bayes_pls_golite062009 |
| gated channel activity | 0.621670335227137 | bayes_pls_golite062009 |
| ligand-gated ion channel activity | 0.41937155561589 | bayes_pls_golite062009 |
| ligand-gated channel activity | 0.41937155561589 | bayes_pls_golite062009 |
| extracellular-glutamate-gated ion channel activity | 0.394485000881621 | bayes_pls_golite062009 |
| ion transmembrane transporter activity | 0.370484918396857 | bayes_pls_golite062009 |
| myosin heavy chain binding | 0.29109171472743 | bayes_pls_golite062009 |
| myosin binding | 0.17223293441022 | bayes_pls_golite062009 |
| passive transmembrane transporter activity | 0.0647076360772156 | bayes_pls_golite062009 |
| channel activity | 0.0647076360772156 | bayes_pls_golite062009 |
| substrate-specific channel activity | 0.0435980899803177 | bayes_pls_golite062009 |
| phospholipid binding | 0.0172309833091902 | bayes_pls_golite062009 |
