Protein: | SY121_ARATH |
Organism: | Arabidopsis thaliana |
Length: | 346 amino acids |
Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SY121_ARATH.
Description | E-value | Query Range |
Subject Range |
|
201.0 | [0..51] | [309..131] |
Region A: Residues: [1-346] |
1 11 21 31 41 51 | | | | | | 1 MNDLFSSSFS RFRSGEPSPR RDVAGGGDGV QMANPAGSTG GVNLDKFFED VESVKEELKE 60 61 LDRLNETLSS CHEQSKTLHN AKAVKDLRSK MDGDVGVALK KAKMIKVKLE ALDRANAANR 120 121 SLPGCGPGSS SDRTRTSVLN GLRKKLMDSM DSFNRLRELI SSEYRETVQR RYFTVTGENP 180 181 DERTLDRLIS TGESERFLQK AIQEQGRGRV LDTINEIQER HDAVKDIEKN LRELHQVFLD 240 241 MAVLVEHQGA QLDDIESHVG RASSFIRGGT DQLQTARVYQ KNTRKWTCIA IIILIIIITV 300 301 VVLAVLKPWN NSSGGGGGGG GGGTTGGSQP NSGTPPNPPQ ARRLLR |
Detection Method: | |
Confidence: | 35.0 |
Match: | 1dn1B |
Description: | Syntaxin 1A N-terminal domain |
Matching Structure (courtesy of the PDB): |
Term | Confidence | Notes |
phosphatidic acid binding | 8.51970136264329 | bayes_pls_golite062009 |
SNAP receptor activity | 3.50393203740159 | bayes_pls_golite062009 |
calcium channel inhibitor activity | 3.28773614634352 | bayes_pls_golite062009 |
protein transporter activity | 2.96543140800925 | bayes_pls_golite062009 |
binding | 2.76125772097759 | bayes_pls_golite062009 |
protein binding | 2.66728689880621 | bayes_pls_golite062009 |
SNARE binding | 1.85060343142976 | bayes_pls_golite062009 |
cytoskeletal protein binding | 1.84645272212664 | bayes_pls_golite062009 |
transporter activity | 1.74189664015129 | bayes_pls_golite062009 |
myosin head/neck binding | 1.62782051964352 | bayes_pls_golite062009 |
extracellular ligand-gated ion channel activity | 1.54368755758216 | bayes_pls_golite062009 |
excitatory extracellular ligand-gated ion channel activity | 1.54368755758216 | bayes_pls_golite062009 |
substrate-specific transporter activity | 1.49085442233849 | bayes_pls_golite062009 |
transmembrane transporter activity | 1.13101548288086 | bayes_pls_golite062009 |
calcium channel regulator activity | 1.03966990325407 | bayes_pls_golite062009 |
substrate-specific transmembrane transporter activity | 0.643064875848901 | bayes_pls_golite062009 |
gated channel activity | 0.621670335227137 | bayes_pls_golite062009 |
ligand-gated ion channel activity | 0.41937155561589 | bayes_pls_golite062009 |
ligand-gated channel activity | 0.41937155561589 | bayes_pls_golite062009 |
extracellular-glutamate-gated ion channel activity | 0.394485000881621 | bayes_pls_golite062009 |
ion transmembrane transporter activity | 0.370484918396857 | bayes_pls_golite062009 |
myosin heavy chain binding | 0.29109171472743 | bayes_pls_golite062009 |
myosin binding | 0.17223293441022 | bayes_pls_golite062009 |
passive transmembrane transporter activity | 0.0647076360772156 | bayes_pls_golite062009 |
channel activity | 0.0647076360772156 | bayes_pls_golite062009 |
substrate-specific channel activity | 0.0435980899803177 | bayes_pls_golite062009 |
phospholipid binding | 0.0172309833091902 | bayes_pls_golite062009 |