| Protein: | RU17_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 427 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RU17_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
175.0 | [0..95] | [425..84] |
|
Region A: Residues: [1-222] |
1 11 21 31 41 51
| | | | | |
1 MGDSGDPFLR NPNAAVQARA KVQNRANVLQ LKLMGQSHPT GLTNNLLKLF EPRPPLEYKP 60
61 PPEKRKCPPY TGMAQFVSNF AEPGDPEYAP PKPEVELPSQ KRERIHKLRL EKGVEKAAED 120
121 LKKYDPNNDP NATGDPYKTL FVSRLNYESS ESKIKREFES YGPIKRVHLV TDQLTNKPKG 180
181 YAFIEYMHTR DMKAAYKQAD GQKIDGRRVL VDVERGRTVP NW
|
| Detection Method: |  |
| Confidence: | 20.39794 |
| Match: | 1fxlA |
| Description: | Hu antigen D (Hud) |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.950788308762215 | bayes_pls_golite062009 |
| nucleic acid binding | 0.29562225149076 | bayes_pls_golite062009 |
|
Region A: Residues: [223-336] |
1 11 21 31 41 51
| | | | | |
1 RPRRLGGGLG TSRVGGGEEI VGEQQPQGRT SQSEEPSRPR EEREKSREKG KERERSRELS 60
61 HEQPRERSRD RPREDKHHRD RDQGGRDRDR DSRRDRDRTR DRGDRDRRDR DRGR
|
| Detection Method: | |
| Confidence: | 14.522879 |
| Match: | 1ha1A |
| Description: | HNRNP A1 (RBD1,2) FROM HOMO SAPIENS |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.950788308762215 | bayes_pls_golite062009 |
| nucleic acid binding | 0.29562225149076 | bayes_pls_golite062009 |
|
Region A: Residues: [337-427] |
1 11 21 31 41 51
| | | | | |
1 DRTSRDHDRD RSRKKERDYE GGEYEHEGGG RSRERDAEYR GEPEETRGYY EDDQGDTDRY 60
61 SHRYDKMEED DFRYEREYKR SKRSESREYV R
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
