| Protein: | MYC2_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 623 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MYC2_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
541.0 | [0..1] | [623..1] |
|
|
425.0 | [0..1] | [623..1] |
|
|
418.0 | [0..59] | [622..7] |
|
|
416.0 | [0..59] | [622..7] |
|
|
416.0 | [0..59] | [622..7] |
|
|
416.0 | [0..66] | [622..14] |
|
|
416.0 | [0..1] | [621..1] |
|
Region A: Residues: [1-76] |
1 11 21 31 41 51
| | | | | |
1 MTDYRLQPTM NLWTTDDNAS MMEAFMSSSD ISTLWPPAST TTTTATTETT PTPAMEIPAQ 60
61 AGFNQETLQQ RLQALI
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.475 | a.3.1 | Cytochrome c |
| View | Download | 0.366 | a.4.8 | Ribosomal protein S18 |
| View | Download | 0.335 | a.3.1 | Cytochrome c |
| View | Download | 0.335 | a.3.1 | Cytochrome c |
| View | Download | 0.268 | a.3.1 | Cytochrome c |
| View | Download | 0.251 | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
| View | Download | 0.237 | a.42.1 | MDM2 |
| View | Download | 0.229 | a.3.1 | Cytochrome c |
| View | Download | 0.217 | a.3.1 | Cytochrome c |
|
Region A: Residues: [77-112] |
1 11 21 31 41 51
| | | | | |
1 EGTHEGWTYA IFWQPSYDFS GASVLGWGDG YYKGEE
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [113-255] |
1 11 21 31 41 51
| | | | | |
1 DKANPRRRSS SPPFSTPADQ EYRKKVLREL NSLISGGVAP SDDAVDEEVT DTEWFFLVSM 60
61 TQSFACGAGL AGKAFATGNA VWVSGSDQLS GSGCERAKQG GVFGMHTIAC IPSANGVVEV 120
121 GSTEPIRQSS DLINKVRILF NFD
|
| Detection Method: | |
| Confidence: | 1.13 |
| Match: | 1vhmA |
| Description: | Crystal structure of an hypothetical protein |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [256-397] |
1 11 21 31 41 51
| | | | | |
1 GGAGDLSGLN WNLDPDQGEN DPSMWINDPI GTPGSNEPGN GAPSSSSQLF SKSIQFENGS 60
61 SSTITENPNL DPTPSPVHSQ TQNPKFNNTF SRELNFSTSS STLVKPRSGE ILNFGDEGKR 120
121 SSGNPDPSSY SGQTQFENKR KR
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.320 | a.138.1 | Multiheme cytochromes |
| View | Download | 0.213 | b.42.1 | Cytokine |
| View | Download | 0.207 | b.76.1 | Outer surface protein A |
|
Region A: Residues: [398-539] |
1 11 21 31 41 51
| | | | | |
1 SMVLNEDKVL SFGDKTAGES DHSDLEASVV KEVAVEKRPK KRGRKPANGR EEPLNHVEAE 60
61 RQRREKLNQR FYALRAVVPN VSKMDKASLL GDAIAYINEL KSKVVKTESE KLQIKNQLEE 120
121 VKLELAGRKA SASGGDMSSS CS
|
| Detection Method: | |
| Confidence: | 16.39794 |
| Match: | 1nkpA |
| Description: | Myc prot-oncogene protein |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [540-623] |
1 11 21 31 41 51
| | | | | |
1 SIKPVGMEIE VKIIGWDAMI RVESSKRNHP AARLMSALMD LELEVNHASM SVVNDLMIQQ 60
61 ATVKMGFRIY TQEQLRASLI SKIG
|
| Detection Method: | |
| Confidence: | 1.17 |
| Match: | 1zpvA |
| Description: | ACT domain protein from Streptococcus pneumoniae |
Matching Structure (courtesy of the PDB): |
|
