| Protein: | PSY_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 422 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PSY_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
491.0 | [0..1] | [422..1] |
|
Region A: Residues: [1-119] |
1 11 21 31 41 51
| | | | | |
1 MSSSVAVLWV ATSSLNPDPM NNCGLVRVLE SSRLFSPCQN QRLNKGKKKQ IPTWSSSFVR 60
61 NRSRRIGVVS SSLVASPSGE IALSSEEKVY NVVLKQAALV NKQLRSSSYD LDVKKPQDV
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [120-422] |
1 11 21 31 41 51
| | | | | |
1 VLPGSLSLLG EAYDRCGEVC AEYAKTFYLG TLLMTPERRK AIWAIYVWCR RTDELVDGPN 60
61 ASHITPMALD RWEARLEDLF RGRPFDMLDA ALADTVARYP VDIQPFRDMI EGMRMDLKKS 120
121 RYQNFDDLYL YCYYVAGTVG LMSVPVMGID PKSKATTESV YNAALALGIA NQLTNILRDV 180
181 GEDARRGRVY LPQDELAQAG LSDEDIFAGK VTDKWRNFMK MQLKRARMFF DEAEKGVTEL 240
241 SAASRWPVWA SLLLYRRILD EIEANDYNNF TKRAYVGKVK KIAALPLAYA KSVLKTSSSR 300
301 LSI
|
| Detection Method: | |
| Confidence: | 56.0 |
| Match: | 1ezfA |
| Description: | Squalene synthase |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| catalytic activity | 1.87397377711135 | bayes_pls_golite062009 |
| transferase activity | 1.34929557841705 | bayes_pls_golite062009 |
| transferase activity, transferring alkyl or aryl (other than methyl) groups | 1.22586398285056 | bayes_pls_golite062009 |
| prenyltransferase activity | 0.302854173865421 | bayes_pls_golite062009 |
