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View Structure Prediction Details

Protein: PSAE2_ARATH
Organism: Arabidopsis thaliana
Length: 145 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PSAE2_ARATH.

Description E-value Query
Range
Subject
Range
gi|21555308 - gi|21555308|gb|AAM63830.1| Photosystem I reaction center subunit IV B, chloroplast precursor (PSI-E ...
172.0 [0..3] [145..1]

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Predicted Domain #1
Region A:
Residues: [1-77]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAMTSAATGF ILTANVPAAI GGGSSKSTTI VSFLPMRSFG SRLVVRAAED TPPATASSDS  60
   61 SSTTAAAAPA KVPAAKA

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [78-145]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KPPPIGPKRG SKVKILRKES YWYKNVGSVV AVDQDPKTRY PVVVRFAKVN YANISTNNYA  60
   61 LDEVEEVK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 25.09691
Match: 2o01E
Description: No description for 2o01E was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle