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View Structure Prediction Details

Protein: PSAE2_ARATH
Organism: Arabidopsis thaliana
Length: 145 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PSAE2_ARATH.

Description E-value Query
Range
Subject
Range
gi|21555308 - gi|21555308|gb|AAM63830.1| Photosystem I reaction center subunit IV B, chloroplast precursor (PSI-E ...
172.0 [0..3] [145..1]

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Predicted Domain #1
Region A:
Residues: [1-77]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAMTSAATGF ILTANVPAAI GGGSSKSTTI VSFLPMRSFG SRLVVRAAED TPPATASSDS  60
   61 SSTTAAAAPA KVPAAKA

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.588 d.58.18 Regulatory domain in the aminoacid metabolism
View Download 0.582 b.84.1 Single hybrid motif
View Download 0.559 d.58.12 eEF-1beta-like
View Download 0.523 d.58.7 RNA-binding domain, RBD
View Download 0.461 d.58.7 RNA-binding domain, RBD

Predicted Domain #2
Region A:
Residues: [78-145]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KPPPIGPKRG SKVKILRKES YWYKNVGSVV AVDQDPKTRY PVVVRFAKVN YANISTNNYA  60
   61 LDEVEEVK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 25.09691
Match: 2o01E
Description: No description for 2o01E was found.

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