| Protein: | PPOC_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 537 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PPOC_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
281.0 | [0..1] | [537..1] |
|
Region A: Residues: [1-537] |
1 11 21 31 41 51
| | | | | |
1 MELSLLRPTT QSLLPSFSKP NLRLNVYKPL RLRCSVAGGP TVGSSKIEGG GGTTITTDCV 60
61 IVGGGISGLC IAQALATKHP DAAPNLIVTE AKDRVGGNII TREENGFLWE EGPNSFQPSD 120
121 PMLTMVVDSG LKDDLVLGDP TAPRFVLWNG KLRPVPSKLT DLPFFDLMSI GGKIRAGFGA 180
181 LGIRPSPPGR EESVEEFVRR NLGDEVFERL IEPFCSGVYA GDPSKLSMKA AFGKVWKLEQ 240
241 NGGSIIGGTF KAIQERKNAP KAERDPRLPK PQGQTVGSFR KGLRMLPEAI SARLGSKVKL 300
301 SWKLSGITKL ESGGYNLTYE TPDGLVSVQS KSVVMTVPSH VASGLLRPLS ESAANALSKL 360
361 YYPPVAAVSI SYPKEAIRTE CLIDGELKGF GQLHPRTQGV ETLGTIYSSS LFPNRAPPGR 420
421 ILLLNYIGGS TNTGILSKSE GELVEAVDRD LRKMLIKPNS TDPLKLGVRV WPQAIPQFLV 480
481 GHFDILDTAK SSLTSSGYEG LFLGGNYVAG VALGRCVEGA YETAIEVNNF MSRYAYK
|
| Detection Method: |  |
| Confidence: | 43.39794 |
| Match: | 1sezA |
| Description: | Crystal Structure of Protoporphyrinogen IX Oxidase |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| oxidoreductase activity, acting on NADH or NADPH | 5.26950448055146 | bayes_pls_golite062009 |
| oxidoreductase activity | 4.51724585323847 | bayes_pls_golite062009 |
| oxygen-dependent protoporphyrinogen oxidase activity | 1.3578742399915 | bayes_pls_golite062009 |
| binding | 1.26657667590853 | bayes_pls_golite062009 |
| oxidoreductase activity, acting on sulfur group of donors, NAD or NADP as acceptor | 1.20561532241252 | bayes_pls_golite062009 |
| oxidoreductase activity, acting on sulfur group of donors | 1.07656675953489 | bayes_pls_golite062009 |
| catalytic activity | 1.03127962968326 | bayes_pls_golite062009 |
| oxidoreductase activity, acting on the CH-NH group of donors | 0.945028138297487 | bayes_pls_golite062009 |
| transporter activity | 0.890824576391732 | bayes_pls_golite062009 |
| transmembrane transporter activity | 0.706117386114413 | bayes_pls_golite062009 |
| hydrogen ion transmembrane transporter activity | 0.705416796630992 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 0.491481205015383 | bayes_pls_golite062009 |
| nucleic acid binding | 0.386071802386842 | bayes_pls_golite062009 |
| NADPH-adrenodoxin reductase activity | 0.31749398611457 | bayes_pls_golite062009 |
| transcription regulator activity | 0.284200164472054 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 0.26114823844682 | bayes_pls_golite062009 |
| DNA binding | 0.175069486065946 | bayes_pls_golite062009 |
| ferrous iron binding | 0.166200528859874 | bayes_pls_golite062009 |
| protein binding | 0.0281459437915129 | bayes_pls_golite062009 |
