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View Structure Prediction Details

Protein: PMG2_ARATH
Organism: Arabidopsis thaliana
Length: 560 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PMG2_ARATH.

Description E-value Query
Range
Subject
Range
GPMI2_METAC, GMI... - 2,3-bisphosphoglycerate-independent phosphoglycerate mutase 2 OS=Methanosarcina acetivorans GN=gpmI2...
GPMI2_METAC - 2,3-bisphosphoglycerate-independent phosphoglycerate mutase 2 OS=Methanosarcina acetivorans (strain ...
664.0 [0..18] [556..9]

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Predicted Domain #1
Region A:
Residues: [1-560]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGSSGDVNWK LADHPKLPKG KTIGLIVLDG WGESDPDQYN CIHKAPTPAM DSLKDGKPDT  60
   61 WRLIKAHGTA VGLPSEDDMG NSEVGHNALG AGRIYAQGAK LVDLALASGK IYEDEGFKYI 120
  121 SQSFEKGTVH LIGLLSDGGV HSRLDQVQLL LKGFAERGAK RIRVHILTDG RDVLDGSSVG 180
  181 FVETLEADLA ALRAKGVDAQ VASGGGRMYV TMDRYENDWS VVKRGWDAQV LGEAPHKFKS 240
  241 ALEAVKTLRA EPGANDQYLP SFVIVDDNGK AVGPIVDGDA VVTFNFRADR MVMHAKALEY 300
  301 KDFDKFDRVR VPDIRYAGML QYDGELKLPS RYLVSPPLID RTSGEYLAHN GVRTFACSET 360
  361 VKFGHVTFFW NGNRSGYFNE KLEEYVEIPS DSGISFNVQP KMKALEIAEK ARDAILSGKF 420
  421 DQVRVNLPNG DMVGHTGDIE ATVVACEAAD RAVRTILDAI EQVGGIYVVT ADHGNAEDMV 480
  481 KRDKSGKPAL DKEGNLQILT SHTLKPVPIA IGGPGLSAGV RFRQDIETPG LANVAATVMN 540
  541 LHGFVAPSDY ETSLIEVVEK 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 1000.0
Match: 1ejjA
Description: 2,3-Bisphosphoglycerate-independent phosphoglycerate mutase, substrate-binding domain; 2,3-Bisphosphoglycerate-independent phosphoglycerate mutase, catalytic domain
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
phosphoglycerate mutase activity 4.09705445001692 bayes_pls_golite062009
hydrolase activity 3.01886601704869 bayes_pls_golite062009
hydrolase activity, acting on ester bonds 2.80771517640162 bayes_pls_golite062009
catalytic activity 2.31328968099128 bayes_pls_golite062009
intramolecular transferase activity, phosphotransferases 1.84947276418569 bayes_pls_golite062009
binding 0.727515968610877 bayes_pls_golite062009
intramolecular transferase activity 0.343539964510921 bayes_pls_golite062009
protein binding 0.0855749430431131 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle