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View Structure Prediction Details

Protein: PEX10_ARATH
Organism: Arabidopsis thaliana
Length: 381 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PEX10_ARATH.

Description E-value Query
Range
Subject
Range
gi|7576235 - gi|7576235|emb|CAB87983.1| Pex10p [Arabidopsis thaliana]
309.0 [0..1] [381..1]

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Predicted Domain #1
Region A:
Residues: [1-381]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRLNGDSGPG QDEPGSSGFH GGIRRFPLAA QPEIMRAAEK DDQYASFIHE ACRDAFRHLF  60
   61 GTRIALAYQK EMKLLGQMLY YVLTTGSGQQ TLGEEYCDII QVAGPYGLSP TPARRALFIL 120
  121 YQTAVPYIAE RISTRAATQA VTFDESDEFF GDSHIHSPRM IDLPSSSQVE TSTSVVSRLN 180
  181 DRLMRSWHRA IQRWPVVLPV AREVLQLVLR ANLMLFYFEG FYYHISKRAS GVRYVFIGKQ 240
  241 LNQRPRYQIL GVFLLIQLCI LAAEGLRRSN LSSITSSIQQ ASIGSYQTSG GRGLPVLNEE 300
  301 GNLITSEAEK GNWSTSDSTS TEAVGKCTLC LSTRQHPTAT PCGHVFCWSC IMEWCNEKQE 360
  361 CPLCRTPNTH SSLVCLYHSD F

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 10.522879
Match: 1fbvA
Description: Cbl; N-terminal domain of cbl (N-cbl); CBL
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
binding 2.55003340159545 bayes_pls_golite062009
protein binding 2.35325421236395 bayes_pls_golite062009
ubiquitin-protein ligase activity 2.20438586677555 bayes_pls_golite062009
small conjugating protein ligase activity 1.97264874084155 bayes_pls_golite062009
signal transducer activity 1.5438780730211 bayes_pls_golite062009
molecular transducer activity 1.5438780730211 bayes_pls_golite062009
acid-amino acid ligase activity 1.26357595913158 bayes_pls_golite062009
transporter activity 1.15928534291452 bayes_pls_golite062009
transmembrane transporter activity 0.945691505472547 bayes_pls_golite062009
cytoskeletal protein binding 0.75057755360417 bayes_pls_golite062009
substrate-specific transporter activity 0.693724160233023 bayes_pls_golite062009
molecular adaptor activity 0.68555837423221 bayes_pls_golite062009
substrate-specific transmembrane transporter activity 0.45412801027969 bayes_pls_golite062009
phosphotransferase activity, alcohol group as acceptor 0.293268642733772 bayes_pls_golite062009
active transmembrane transporter activity 0.246383459363256 bayes_pls_golite062009
protein binding, bridging 0.230308623372106 bayes_pls_golite062009
kinase activity 0.193243470329802 bayes_pls_golite062009
ion transmembrane transporter activity 0.193201281459889 bayes_pls_golite062009
protein kinase activity 0.0865488336042732 bayes_pls_golite062009
cation transmembrane transporter activity 0.0305250212662123 bayes_pls_golite062009
receptor binding 0.00920732436841987 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle