| Protein: | PSD3B_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 487 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PSD3B_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
394.0 | [0..1] | [487..1] |
|
|
389.0 | [0..1] | [487..1] |
|
|
388.0 | [0..1] | [487..1] |
|
|
388.0 | [0..1] | [487..1] |
|
|
381.0 | [0..2] | [487..32] |
|
|
375.0 | [0..2] | [486..131] |
|
Region A: Residues: [1-76] |
1 11 21 31 41 51
| | | | | |
1 MTQDVEMKDN QTPTQSVVSA PTSTLQNLKE IAALIDTGSY TKEVRRIARA VRLTVGLRRK 60
61 LTGSVISSFL DFALVP
|
| Detection Method: |  |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.803 | N/A | N/A | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
| View | Download | 0.753 | N/A | N/A | a.118.1 | ARM repeat |
| View | Download | 0.743 | N/A | N/A | a.48.3 | Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 |
| View | Download | 0.743 | N/A | N/A | a.48.3 | Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 |
| View | Download | 0.729 | N/A | N/A | a.218.1 | Description not found. |
| View | Download | 0.721 | N/A | N/A | a.56.1 | CO dehydrogenase ISP C-domain like |
| View | Download | 0.721 | N/A | N/A | a.56.1 | CO dehydrogenase ISP C-domain like |
| View | Download | 0.715 | N/A | N/A | a.56.1 | CO dehydrogenase ISP C-domain like |
| View | Download | 0.715 | N/A | N/A | a.56.1 | CO dehydrogenase ISP C-domain like |
| View | Download | 0.384 | N/A | N/A | a.74.1 | Cyclin-like |
| View | Download | 0.360 | N/A | N/A | a.159.1 | Protein serine/threonine phosphatase 2C, C-terminal domain |
| View | Download | 0.354 | N/A | N/A | a.74.1 | Cyclin-like |
| View | Download | 0.349 | N/A | N/A | a.37.1 | A DNA-binding domain in eukaryotic transcription factors |
| View | Download | 0.307 | N/A | N/A | a.74.1 | Cyclin-like |
|
Region A: Residues: [77-294] |
1 11 21 31 41 51
| | | | | |
1 GSEAHTRLSS FVPKSDEHDM EVDTASSNSQ APPKHLPAEL EIYCYFIVLL FLIDQKKYNE 60
61 AKVCSTASIA RLKSVNRRTV DVIASKLYFY YSLSYELTND LAEIRSTLLA LHHSATLRHD 120
121 ELGQETLLNL LLRNYLHYNL YDQAEKLRSK APRFEAHSNQ QFCRYLFYLG KIRTIQLEYT 180
181 DAKESLLQAA RKAPVASLGF RIQCNKWAII VRLLLGEI
|
| Detection Method: | |
| Confidence: | 5.045757 |
| Match: | 2fo7A |
| Description: | Crystal structure of an 8 repeat consensus TPR superhelix (trigonal crystal form) |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [295-487] |
1 11 21 31 41 51
| | | | | |
1 PERSIFTQKG MEKTLRPYFE LTNAVRIGDL ELFGKIQEKF AKTFAEDRTH NLIVRLRHNV 60
61 IRTGLRNISI SYSRISLQDV AQKLRLNSAN PVADAESIVA KAIRDGAIDA TIDHKNGCMV 120
121 SKETGDIYST NEPQTAFNSR IAFCLNMHNE AVRALRFPPN THREKESEEK RREMKQQEEE 180
181 LAKYMAEEDD DDF
|
| Detection Method: | |
| Confidence: | 8.69897 |
| Match: | 1ufmA |
| Description: | Solution structure of the PCI domain |
Matching Structure (courtesy of the PDB): |
|
