| Protein: | PCNA1_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 263 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PCNA1_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
323.0 | [0..1] | [261..206] |
|
Region A: Residues: [1-263] |
1 11 21 31 41 51
| | | | | |
1 MLELRLVQGS LLKKVLESIK DLVNDANFDC SSTGFSLQAM DSSHVALVSL LLRSEGFEHY 60
61 RCDRNLSMGM NLGNMSKMLK CAGNDDIITI KADDGGDTVT FMFESPTQDK IADFEMKLMD 120
121 IDSEHLGIPD AEYHSIVRMP SNEFSRICKD LSSIGDTVVI SVTKEGVKFS TAGDIGTANI 180
181 VLRQNTTVDK PEDAIVIEMK EPVSLSFALR YMNSFTKATP LSDTVTISLS SELPVVVEYK 240
241 VAEMGYIRYY LAPKIEEEED TNP
|
| Detection Method: |  |
| Confidence: | 82.221849 |
| Match: | 1axcA |
| Description: | Prolifirating cell nuclear antigen (PCNA) |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| DNA polymerase processivity factor activity | 9.9878881203193 | bayes_pls_golite062009 |
| DNA-directed DNA polymerase activity | 5.01426276108174 | bayes_pls_golite062009 |
| DNA polymerase activity | 4.9656505576274 | bayes_pls_golite062009 |
| nucleotidyltransferase activity | 3.23598180825386 | bayes_pls_golite062009 |
| mismatched DNA binding | 2.75713709757781 | bayes_pls_golite062009 |
| DNA insertion or deletion binding | 2.48680473192192 | bayes_pls_golite062009 |
| nucleic acid binding | 2.32553487472442 | bayes_pls_golite062009 |
| DNA binding | 2.24518789437215 | bayes_pls_golite062009 |
| binding | 1.88302251910664 | bayes_pls_golite062009 |
| dinucleotide insertion or deletion binding | 1.68153838099672 | bayes_pls_golite062009 |
| mismatch repair complex binding | 1.6296761041903 | bayes_pls_golite062009 |
| MutLalpha complex binding | 1.21442872292245 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 1.14392061238362 | bayes_pls_golite062009 |
| structure-specific DNA binding | 0.785542777582287 | bayes_pls_golite062009 |
| catalytic activity | 0.48077242755678 | bayes_pls_golite062009 |
| double-stranded DNA binding | 0.457118392479642 | bayes_pls_golite062009 |
| protein binding | 0.452894757163315 | bayes_pls_golite062009 |
| purine-specific mismatch base pair DNA N-glycosylase activity | 0.408841404605319 | bayes_pls_golite062009 |
| mismatch base pair DNA N-glycosylase activity | 0.387975438046246 | bayes_pls_golite062009 |
| transferase activity | 0.345371754708312 | bayes_pls_golite062009 |
