| Protein: | PAL4_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 707 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PAL4_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
1042.0 | [0..1] | [707..1] |
|
Region A: Residues: [1-707] |
1 11 21 31 41 51
| | | | | |
1 MELCNQNNHI TAVSGDPLNW NATAEALKGS HLDEVKRMVK EYRKEAVKLG GETLTIGQVA 60
61 AVARGGGGST VELAEEARAG VKASSEWVME SMNRGTDSYG VTTGFGATSH RRTKQGGALQ 120
121 NELIRFLNAG IFGPGAGDTS HTLPKPTTRA AMLVRVNTLL QGYSGIRFEI LEAITKLLNH 180
181 EITPCLPLRG TITASGDLVP LSYIAGLLTG RPNSKAVGPS GETLTASEAF KLAGVSSFFE 240
241 LQPKEGLALV NGTAVGSGLA STVLFDANIL AVLSEVMSAM FAEVMQGKPE FTDHLTHKLK 300
301 HHPGQIEAAA IMEHILDGSS YVKEAQLLHE MDPLQKPKQD RYALRTSPQW LGPQIEVIRA 360
361 ATKMIEREIN SVNDNPLIDV SRNKALHGGN FQGTPIGVAM DNSRLAIASI GKLMFAQFSE 420
421 LVNDFYNNGL PSNLSGGRNP SLDYGFKGAE IAMASYCSEL QFLANPVTNH VQSAEQHNQD 480
481 VNSLGLISSR KTAEAVDILK LMSTTYLVAL CQAVDLRHLE ENLKKAVKSA VSQVAKRVLT 540
541 VGANGELHPS RFTERDVLQV VDREYVFSYA DDPCSLTYPL MQKLRHILVD HALADPEREA 600
601 NSATSVFHKI GAFEAELKLL LPKEVERVRV EYEEGTSAIA NRIKECRSYP LYRFVRDELN 660
661 TELLTGENVR SPGEEFDKVF LAISDGKLID PLLECLKEWN GAPVSIC
|
| Detection Method: |  |
| Confidence: | 1000.0 |
| Match: | 1w27A |
| Description: | Phenylalanine ammonia-lyase (PAL) from Petroselinum crispum |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| histidine ammonia-lyase activity | 3.53226750625841 | bayes_pls_golite062009 |
| catalytic activity | 2.51282259572665 | bayes_pls_golite062009 |
| lyase activity | 2.31268471569846 | bayes_pls_golite062009 |
| carbon-nitrogen lyase activity | 2.2046475419807 | bayes_pls_golite062009 |
| amidine-lyase activity | 0.901614580251298 | bayes_pls_golite062009 |
| argininosuccinate lyase activity | 0.617974375213548 | bayes_pls_golite062009 |
| ammonia-lyase activity | 0.491229595527877 | bayes_pls_golite062009 |
| fumarate hydratase activity | 0.364320954362762 | bayes_pls_golite062009 |
