| Protein: | PABP2_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 629 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
No multiple sequence alignment data found for PABP2_ARATH.
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Region A: Residues: [1-210] |
1 11 21 31 41 51
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1 MAQVQLQGQT PNGSTAAVTS APATSGGATA TQFGNTSLYV GDLDFNVTDS QLFDAFGQMG 60
61 TVVTVRVCRD LVTRRSLGYG YVNFTNPQDA ARAIQELNYI PLYGKPIRVM YSHRDPSVRR 120
121 SGAGNIFIKN LDESIDHKAL HDTFSSFGNI VSCKVAVDSS GQSKGYGFVQ YANEESAQKA 180
181 IEKLNGMLLN DKQVYVGPFL RRQERDSTAN
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| Detection Method: |  |
| Confidence: | 53.0 |
| Match: | 1cvjA |
| Description: | Poly(A)-binding protein |
Matching Structure (courtesy of the PDB): |
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Region A: Residues: [211-314] |
1 11 21 31 41 51
| | | | | |
1 KTKFTNVYVK NLAESTTDDD LKNAFGEYGK ITSAVVMKDG EGKSKGFGFV NFENADDAAR 60
61 AVESLNGHKF DDKEWYVGRA QKKSERETEL RVRYEQNLKE AADK
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| Detection Method: | |
| Confidence: | 4.69897 |
| Match: | 2cpyA |
| Description: | solution structure of RNA binding domain 3 in RNA binding motif protein 12 |
Matching Structure (courtesy of the PDB): |
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Region A: Residues: [315-394] |
1 11 21 31 41 51
| | | | | |
1 FQSSNLYVKN LDPSISDEKL KEIFSPFGTV TSSKVMRDPN GTSKGSGFVA FATPEEATEA 60
61 MSQLSGKMIE SKPLYVAIAQ
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| Detection Method: | |
| Confidence: | 17.39794 |
| Match: | 2d9pA |
| Description: | No description for 2d9pA was found. |
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Region A: Residues: [395-475] |
1 11 21 31 41 51
| | | | | |
1 RKEDRRVRLQ AQFSQVRPVA MQPSVGPRMP VYPPGGPGIG QQMFYGQAPP AMIPPQPGYG 60
61 YQQQLVPGMR PGGGPVPSFF M
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| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
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Region A: Residues: [476-629] |
1 11 21 31 41 51
| | | | | |
1 PMVQPQQQRP GGGRRPGGIQ HSQQQNPMMQ QQMHPRGRMF RYPQGRGGSG DVPPYDMGNN 60
61 MPLTIGALAS NLSNATPEQQ RTMLGEVLYP LVEQVEAESA AKVTGMLLEM DQTEVLHLLE 120
121 SPEALKAKVA EAMDVLRSVA AGGATEQLAS LNLS
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| Detection Method: | |
| Confidence: | 32.045757 |
| Match: | 1g9lA |
| Description: | poly(A) binding protein |
Matching Structure (courtesy of the PDB): |
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