YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: P2C77_ARATH
Organism: Arabidopsis thaliana
Length: 423 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for P2C77_ARATH.

Description E-value Query
Range
Subject
Range
P2C56_ARATH - Protein phosphatase 2C 56 OS=Arabidopsis thaliana GN=ABI1 PE=1 SV=2
298.0 [0..1] [423..1]

Back

Predicted Domain #1
Region A:
Residues: [1-93]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDEVSPAVAV PFRPFTDPHA GLRGYCNGES RVTLPESSCS GDGAMKDSSF EINTRQDSLT  60
   61 SSSSAMAGVD ISAGDEINGS DEFDPRSMNQ SEK

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [94-423]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KVLSRTESRS LFEFKCVPLY GVTSICGRRP EMEDSVSTIP RFLQVSSSSL LDGRVTNGFN  60
   61 PHLSAHFFGV YDGHGGSQVA NYCRERMHLA LTEEIVKEKP EFCDGDTWQE KWKKALFNSF 120
  121 MRVDSEIETV AHAPETVGST SVVAVVFPTH IFVANCGDSR AVLCRGKTPL ALSVDHKPDR 180
  181 DDEAARIEAA GGKVIRWNGA RVFGVLAMSR SIGDRYLKPS VIPDPEVTSV RRVKEDDCLI 240
  241 LASDGLWDVM TNEEVCDLAR KRILLWHKKN AMAGEALLPA EKRGEGKDPA AMSAAEYLSK 300
  301 MALQKGSKDN ISVVVVDLKG IRKFKSKSLN 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 61.69897
Match: 1a6qA
Description: CRYSTAL STRUCTURE OF THE PROTEIN SERINE/THREONINE PHOSPHATASE 2C AT 2 A RESOLUTION
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
phosphoprotein phosphatase activity 7.29765002420868 bayes_pls_golite062009
phosphatase activity 6.46633224572308 bayes_pls_golite062009
phosphoric ester hydrolase activity 6.25564034681743 bayes_pls_golite062009
protein serine/threonine phosphatase activity 5.66354576593165 bayes_pls_golite062009
hydrolase activity, acting on ester bonds 5.62997267604309 bayes_pls_golite062009
hydrolase activity 4.10826723952347 bayes_pls_golite062009
binding 1.74689317666387 bayes_pls_golite062009
catalytic activity 1.53401212718168 bayes_pls_golite062009
protein binding 1.47578617076714 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle