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View Structure Prediction Details

Protein: FACR2_ARATH
Organism: Arabidopsis thaliana
Length: 616 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FACR2_ARATH.

Description E-value Query
Range
Subject
Range
gi|396835, gi|44... - gi|448297|prf||1916413A male sterility 2 gene, gi|421835|pir||S33804 male sterility protein 2 - Arab...
291.0 [0..1] [616..1]

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Predicted Domain #1
Region A:
Residues: [1-111]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEALFLSSSS SSIVASNKLT RLHNHCVWST VIRDKKRFGP TWCRVGGGGD GGRNSNAERP  60
   61 IRVSSLLKDR GQVLIREQSS PAMDAETLVL SPNGNGRTIE INGVKTLMPF S

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 15.045757
Match: 2gdwA
Description: No description for 2gdwA was found.

Predicted functions:

Term Confidence Notes
acyl carrier activity 4.03850102890301 bayes_pls_golite062009
catalytic activity 0.037428828577411 bayes_pls_golite062009

Predicted Domain #2
Region A:
Residues: [112-616]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GASMVGMKEG LGIISFLQGK KFLITGSTGF LAKVLIEKVL RMAPDVSKIY LLIKAKSKEA  60
   61 AIERLKNEVL DAELFNTLKE THGASYMSFM LTKLIPVTGN ICDSNIGLQA DSAEEIAKEV 120
  121 DVIINSAANT TFNERYDVAL DINTRGPGNL MGFAKKCKKL KLFLQVSTAY VNGQRQGRIM 180
  181 EKPFSMGDCI ATENFLEGNR KALDVDREMK LALEAARKGT QNQDEAQKMK DLGLERARSY 240
  241 GWQDTYVFTK AMGEMMINST RGDVPVVIIR PSVIESTYKD PFPGWMEGNR MMDPIVLCYG 300
  301 KGQLTGFLVD PKGVLDVVPA DMVVNATLAA IAKHGMAMSD PEPEINVYQI ASSAINPLVF 360
  361 EDLAELLYNH YKTSPCMDSK GDPIMVRLMK LFNSVDDFSD HLWRDAQERS GLMSGMSSVD 420
  421 SKMMQKLKFI CKKSVEQAKH LATIYEPYTF YGGRFDNSNT QRLMENMSED EKREFGFDVG 480
  481 SINWTDYITN VHIPGLRRHV LKGRA

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 35.0
Match: 1z45A
Description: Crystal structure of the gal10 fusion protein galactose mutarotase/UDP-galactose 4-epimerase from Saccharomyces cerevisiae complexed with NAD, UDP-glucose, and galactose
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
3-hydroxyacyl-CoA dehydrogenase activity 2.04225907952394 bayes_pls_golite062009
oxidoreductase activity, acting on the CH-CH group of donors 2.03461533859253 bayes_pls_golite062009
catalytic activity 1.79741889688267 bayes_pls_golite062009
oxidoreductase activity 1.69771604880532 bayes_pls_golite062009
fatty acid synthase activity 1.23679054027553 bayes_pls_golite062009
3-oxoacyl-[acyl-carrier-protein] reductase activity 0.604742541607263 bayes_pls_golite062009
oxidoreductase activity, acting on CH-OH group of donors 0.418775403210681 bayes_pls_golite062009
oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor 0.32207755075663 bayes_pls_golite062009

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