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View Structure Prediction Details

Protein: LPP2_ARATH
Organism: Arabidopsis thaliana
Length: 290 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for LPP2_ARATH.

Description E-value Query
Range
Subject
Range
gi|38637528, gi|... - gi|50944813|ref|XP_481934.1| unknown protein [Oryza sativa (japonica cultivar-group)], gi|38637528|d...
239.0 [0..1] [284..1]

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Predicted Domain #1
Region A:
Residues: [1-65]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPEIHLGAHT IRSHGVTVAR FHMHDWLILL LLIVIEIVLN VIEPFHRFVG EDMLTDLRYP  60
   61 LQDNT

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [66-290]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 IPFWAVPLIA VVLPFAVICV YYFIRNDVYD LHHAILGLLF SVLITGVITD AIKDAVGRPR  60
   61 PDFFWRCFPD GIGIFHNVTK NVLCTGAKDV VKEGHKSFPS GHTSWSFAGL GFLSLYLSGK 120
  121 IRVFDQRGHV AKLCIVILPL LVAALVGVSR VDDYWHHWQD VFGGAIIGLT VATFCYLQFF 180
  181 PPPYDPDGWG PHAYFQMLAD SRNDVQDSAG MNHLSVRQTE LESVR

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 13.09691
Match: 1iw8A
Description: Bacterial acid phosphatase
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle