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View Structure Prediction Details

Protein: LPP2_ARATH
Organism: Arabidopsis thaliana
Length: 290 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for LPP2_ARATH.

Description E-value Query
Range
Subject
Range
gi|38637528, gi|... - gi|50944813|ref|XP_481934.1| unknown protein [Oryza sativa (japonica cultivar-group)], gi|38637528|d...
239.0 [0..1] [284..1]

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Predicted Domain #1
Region A:
Residues: [1-65]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPEIHLGAHT IRSHGVTVAR FHMHDWLILL LLIVIEIVLN VIEPFHRFVG EDMLTDLRYP  60
   61 LQDNT

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [66-290]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 IPFWAVPLIA VVLPFAVICV YYFIRNDVYD LHHAILGLLF SVLITGVITD AIKDAVGRPR  60
   61 PDFFWRCFPD GIGIFHNVTK NVLCTGAKDV VKEGHKSFPS GHTSWSFAGL GFLSLYLSGK 120
  121 IRVFDQRGHV AKLCIVILPL LVAALVGVSR VDDYWHHWQD VFGGAIIGLT VATFCYLQFF 180
  181 PPPYDPDGWG PHAYFQMLAD SRNDVQDSAG MNHLSVRQTE LESVR

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 13.09691
Match: 1iw8A
Description: Bacterial acid phosphatase
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle