| Protein: | LBD30_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 228 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for LBD30_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
230.0 | [0..20] | [227..40] |
|
Region A: Residues: [1-145] |
1 11 21 31 41 51
| | | | | |
1 MSSSGNPSSS SGGGGGPCGA CKFLRRKCVA GCIFAPYFDS EQGAAHFAAV HKVFGASNVS 60
61 KLLHHVPEHK RPDAVVSICF EAQARLRDPI YGCVSHIVSL QQQVVSLQTE LSYLQAHLAT 120
121 LELPQPQPPQ VPVSSSGSLQ ALSIT
|
| Detection Method: |  |
| Confidence: | 71.823909 |
| Match: | PF03195.5 |
| Description: | No description for PF03195.5 was found. |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [146-228] |
1 11 21 31 41 51
| | | | | |
1 DLPTISPSVY DLSSIFEPVM SSTWAMQQQP RPSDHLFGVP SSSNMGGGGE LQALAREFIH 60
61 GGQMPAQPSP GTSGSASSVI KRE
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.632 | a.165.1 | Myosin phosphatase inhibitor 17kDa protein, CPI-17 |
| View | Download | 0.583 | d.58.49 | YajQ-like |
| View | Download | 0.462 | a.60.9 | lambda integrase-like, N-terminal domain |
| View | Download | 0.405 | a.60.9 | lambda integrase-like, N-terminal domain |
| View | Download | 0.359 | a.60.9 | lambda integrase-like, N-terminal domain |
